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Table 3 Distribution of clusters and hotspots over genome

From: A comprehensive meta QTL analysis for fiber quality, yield, yield related and morphological traits, drought tolerance, and disease resistance in tetraploid cotton

Chromosome Cluster name Approximate position on chromosome (cM) # of QTL Hotspot name Approximate position on chromosome (cM) # of QTL
c1 c1-cluster-1 14-34 9 c1-FL-Hotspot-1 66-86 5
c1-cluster-2 58-82 10    
c1-cluster-3 95-126 7    
c2 c2-cluster-1 0-14 5 c2-FE-Hotspot-1 30-43 4
c2-cluster-2 32-52 13    
c2-cluster-3 82-105 5    
c3 c3-cluster-1 0-20 15 c3-FL-Hotspot-2 0-20 7
c3-cluster-2 23-48 23 c3-FL-Hotspot-3 43-55 5
    c3-Micronaire-Hotspot-1 23-43 5
c4 c4-cluster-1 0-8 7 c4-FL-Hotspot-4 46-58 5
c4-cluster-2 46-66 10 c4-Micronaire-Hotspot-2 34-55 4
c5 c5-cluster-1 0-20 15 c5-Micronaire-Hotspot-3 0-20 5
c5-cluster-2 22-42 16 c5-Nematode-Hotspot-1 27-47 6
c5-cluster-3 59-79 5    
c5-cluster-4 84-104 14    
c6 c6-cluster-1 0-17 19 c6-color-Hotspot-1 8-17 6
c6-cluster-2 24-37 6 c6-Micronaire-Hotspot-4 0-24 4
c6-cluster-3 53-67 10    
c7 c7-cluster-1 0-25 32 c7-FL-Hotspot-5 0-18 4
c7-cluster-2 43-59 9 c7-FS-Hotspot-1 0-27 5
c7-cluster-3 72-91 5 c7-Nematode-Hotspot-2 0-22 9
c8 c8-cluster-1 0-20 6 c8-color-Hotspot-2 20-39 7
c8-cluster-2 25-39 9    
c8-cluster-3 107-144 5    
c9 c9-cluster-1 0-20 16    
c9-cluster-2 29-54 14    
c10 c10-cluster-1 0-20 13 c10-Micronaire-Hotspot-5 0-20 4
c10-cluster-2 79-112 12    
c11 c11-cluster-1 0-20 26 c11-Nematode-Hotspot-3 0-20 14
c12 c12-cluster-1 0-16 11 c12-FL-Hotspot-6 72-91 6
c12-cluster-2 18-38 19 c12-FU-Hotspot-1 23-34 5
c12-cluster-3 67-85 10 c12-Micronaire-Hotspot-6 0-16 4
    c12-Micronaire-Hotspot-7 23-34 4
c13 c13-cluster-1 0-17 6    
c13-cluster-2 29-44 6    
c14 c14-cluster-1 0-20 30 c14-Micronaire-Hotspot-8 99-118 5
c14-cluster-2 52-66 10 c-14-Nematode-Hotspot-4 0-15 8
c14-cluster-3 82-91 7    
c14-cluster-4 99-122 16    
c15 c15-cluster-1 0-17 8 c15-FE-Hotspot-2 17-39 5
c15-cluster-2 20-44 24 c15-Leaf-Hotspot-1 17-39 6
c15-cluster-3 60-68 10 c15-Microanaire-Hotspot-9 23-49 10
c16 c16-cluster-1 0-23 28 c16-Micronaire-Hotspot-10 0-23 8
c16-cluster-2 30-40 9 c16-VW-Hotspot-1 0-23 5
c16-cluster-3 50-70 16 c16-VW-Hotspot-2 30-50 7
    c16-VW-Hotspot-3 51-64 4
c17 c17-cluster-1 5-23 12 c17-FU-Hotspot-2 63-78 4
c17-cluster-2 53-78 13 c17-Micronaire-Hotspot-11 11-27 5
c18 c18-cluster-1 0-19 15 c18-Micronaire-Hotspot-12 28-43 5
c18-cluster-2 28-43 9    
c18-cluster-3 53-65 7    
c18-cluster-4 76-93 8    
c19 c19-cluster-1 0-20 14 c19-FE-Hotspot-3 124-144 4
c19-cluster-2 32-52 14 c19-Micronaire-Hotspot-13 0-25 4
c19-cluster-3 62-82 5    
c19-cluster-4 97-117 5    
c19-cluster-5 124-144 12    
c20 c20-cluster-1 0-20 7    
c20-cluster-2 25-45 13    
c20-cluster-3 117-137 5    
c21 c21-cluster-1 12-32 6 c21-Micronaire-Hotspot-14 60-81 4
c21-cluster-2 48-64 12    
c21-cluster-3 70-87 8    
c21-cluster 4 96-104 5    
c22 c22-cluster-1 0-22 19    
c23 c23-cluster-1 0-22 26 c23-FE-Hotspot-4 0-22 4
c23-cluster-2 25-35 10 c23-FS-Hotspot-2 77-85 6
c23-cluster-3 40-70 10 c23-VW-Hotspot-4 0-21 13
c23-cluster-4 76-87 11 c23-VW-Hotspot-5 26-46 9
c23-cluster-5 102-119 7    
c24 c24-cluster-1 0-17 13 c24-FS-Hotspot-3 31-51 16
c24-cluster-2 17-19 6 c24-Micronaire-Hotspot-15 0-19 4
c24-cluster-3 35-45 17 c24-Micronaire-Hotspot-16 29-35 4
c24-cluster-4 56-66 5 c24-Micronaire-Hotspot-17 92-110 4
c25 c25-cluster-1 0-21 21 c25-color-Hotspot-3 21-40 4
c25-cluster-2 40-62 13 c25-color-Hotspot-4 55-75 7
c25-cluster-3 73-89 17 c25-Micronaire-Hotspot-18 0-21 10
    c25-Micronaire-Hotspot-19 33-65 4
c26 c26-cluster-1 0-22 14 c26-FL-Hotspot-7 0-22 4
c26-cluster-2 33-51 19 c26-FL-Hotspot-8 45-65 6
    c26-Micronaire-Hotspot-20 28-45 6
  1. QTL cluster and hotspot locations on the genome are described in the table below. Locations are given in cM regions which are seen graphically in Figure 1.