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Figure 3 | BMC Genomics

Figure 3

From: Genome wide analysis reveals single nucleotide polymorphisms associated with fatness and putative novel copy number variants in three pig breeds

Figure 3

QuantiSNP output for Titan chromosome 1. Legend: QuantiSNP output for Titan chromosome 1. Red lines depict CNVs discovered in fat pigs and green lines depict those found in lean pigs. To distinguish between levels of significance (determined by Log Bayes Factors), a darker line (either red or green, as shown in the key) indicates a high Log Bayes Factor (>30), and therefore a higher level of significance, while a paler line indicates samples with a Log Bayes Factor of between 10 and 30 (therefore with a lower significance value). Lines above the x-axis in the middle of the figure, indicate gains in copy number whilst lines below are losses. The chromosome position in Mb is shown below the graph and the y axis is scaled by copy number count.

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