Table 2 Repetitive elements identified by RepeatMasker in the sequences of BAC clones
Repetitive content | Percentage share | ||||
|---|---|---|---|---|---|
055L12[EMBL:HE804809] | 067H16[EMBL:HE804811] | 004G15[EMBL:HE804808] | 057J20[EMBL:HE804810] | 080B11[EMBL:HE804812] | |
Retrotransposons | 38.2% | 32.7% | 6.9% | 17.3% | - |
LINE | 0.8% | - | 0.5% | 6.8% | - |
Ty1/Copia | 30.3% | 6.0% | - | 4.8% | - |
Ty3/Gypsy | 7.0% | 26.7% | 6.4% | 5.8% | - |
Transposons | 2.8% | 0.6% | 0.1% | 0.4% | - |
En-Spm | 2.3% | - | - | - | - |
MuDR | 0.5% | - | 0.1% | 0.0% | - |
hobo-Activator | - | 0.6% | - | - | - |
RC/Helitron | - | - | - | 0.4% | - |
Unclassified | - | 0.1% | 0.5% | 0.3% | - |
Total interspersed repeats | 41.0% | 33.4% | 7.5% | 18.0% | - |
Simple repeats: | 0.1% | 0.2% | 0.1% | - | 0.1% |