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Table 4 Abbreviation of time-points and transcript lists

From: The planarian regeneration transcriptome reveals a shared but temporally shifted regulatory program between opposing head and tail scenarios

Abbreviation Description Lists
F Transcripts enriched in a head or tail fragment at 0 hours F-head – transcripts enriched in head vs tail at 0 hours
F-tail – transcripts enriched in tail vs head at 0 hours
H Up and down-regulated transcripts in head fragments. Time-period is indicated after the abbreviation. H6-12-down – Transcripts down-regulated from 6 to 12 hours in regenerating head fragments
H6-12-up – Transcripts up-regulated from 6- 12 hours in regenerating head fragments.
T Up and down-regulated transcripts in tail fragments. Time-period is indicated after the abbreviation. T36-48-down – Transcripts down-regulated from 36-48 hours in regenerating tail fragments.
T36-48-up – Transcripts up-regulated from 36-48 hours in regenerating tail fragments.
O Up and down regulated shared transition between H and T. O-up – Transcripts shared between H6-12-up and T36-48-up.
O-down – Transcripts shared between H6-12-down and T36-48-down.
P Transcripts up and down regulated in response to smed-prep(RNAi) tail fragment 24 hours after amputation P-up – Transcripts down-regulated in smed-prep(RNAi) tail fragments 24 hours after amputation.
P-down – Transcripts up-regulated in smed-prep(RNAi) tail fragments 24 hours after amputation.