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Table 5 The genes in the NCAPG-specific networks

From: A systems biology approach using metabolomic data reveals genes and pathways interacting to modulate divergent growth in cattle

  Connectivity
GeneID Official gene name* BTA Position [UMD 3.1] NCAPG-specific sub-network (MCODE derived)§ NCAPG-specific network§
ACCN1 Acid-sensing (proton-gated) ion channel 2 19 16353062 - 17563070 13 21
ADAM15 ADAM metallopeptidase domain 15 3 15593181 - 15603336 10 23
AGTPBP1 ATP/GTP binding protein 1 8 80235082 - 80433151 8 13
ALK Anaplastic lymphoma receptor tyrosine kinase 11 70321848 - 70646314 12 15
ARNTL2 Aryl hydrocarbon receptor nuclear translocator-like 2 5 82875251 - 82956797 0 9
ASB5 Ankyrin repeat and SOCS box containing 5 27 6692312 - 6736965 11 15
BRE Brain and reproductive organ-expressed (TNFRSF1A modulator) 11 71403124 - 71826561 13 18
CAPN2 Calpain 2, (m/II) large subunit 16 27781671 - 27840011 0 11
DNAJC2 DnaJ (Hsp40) homolog, subfamily C, member 2 4 44769574 - 44803651 0 4
Drosophila Single-minded homolog 1 (Drosophila) 9 50160697 - 50228919 0 12
ELMO1 Engulfment and cell motility 1 4 60356210 - 60838995 0 14
ELOVL5 ELOVL fatty acid elongase 5 23 25155742 - 25228997 0 37
FSHR Follicle stimulating hormone receptor 11 31110744 - 31305197 13 16
GRIK2 Glutamate receptor, ionotropic, kainate 2 9 48857302 - 48925683 11 14
IGSF21 Immunoglobin superfamily, member 21 2 134864753 - 135060996 0 8
INSR Insulin receptor 7 17279726 - 17421470 0 7
ITPKB Inositol-trisphosphate 3-kinase B 16 30390092 - 30491749 0 12
JAZF1 AZF zinc finger 1 4 68444035 - 68773107 0 14
LPL Lipoprotein lipase 8 67497758 - 67511231 0 4
MRVI1 Murine retrovirus integration site 1 homolog 15 42548308 - 42674631 13 22
MXD4 MAX dimerization protein 4 6 108490181 - 108501583 0 13
NCAPG Non-SMC condensin I complex, subunit G 6 38765969 - 38812056 13 37
p600 Interleukin 13 7 23018546 - 23020546 0 11
PBX4 Pre-B-cell leukemia homeobox 4 7 3631055 - 3685738 11 17
PDE4D Phosphodiesterase 4D, cAMP-specific 20 18748587 - 20322583 0 10
PLCB4 Phospholipase C, beta 4 13 2211089 - 2411116 0 15
POLR2G Polymerase (RNA) II (DNA directed) polypeptide G 29 41777025 - 41780284 10 17
PPP1R3A Protein phosphatase 1, regulatory subunit 3A 4 54866421 - 54906488 0 6
PTPRD Protein tyrosine phosphatase, receptor type, D 8 36342559 - 36800975 13 27
RAB6IP1 RAB6 interacting protein 1 15 43965508 - 44059813 0 12
RBMS3 RNA binding motif, single stranded interacting protein 3 22 3898961 - 4695095 0 7
RGS7 Regulator of G-protein signaling 7 16 36478831 - 36695721 0 12
SCPEP1 Serine carboxypeptidase 1 19 8018816 - 8052591 0 8
SMG6 Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans) 19 23660756 - 23858481 11 16
SPAG9 Sperm associated antigen 9 19 36343607 - 36422983 0 1
THSD7A Thrombospondin, type I, domain containing 7A 4 19451228 - 19727594 0 14
ZBTB16 Zinc finger and BTB domain containing 16 15 24917133 - 25116350 0 10
  1. †Bos taurus chromosome.
  2. *In accordance with HUGO Gene Nomenclature Committee (HGNC) definitions.
  3. §Total number of genes to which the target gene is connected via a direct edge.