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Table 1 Annotations of the clean reads from three cabbage samples

From: High-throughput sequencing identification of novel and conserved miRNAs in the Brassica oleracea leaves

Category Unique reads S1/S2/S3* Total reads S1/S2/S3* Percent (%) of total reads S1/S2/S3*
Clean reads 5866438 / 6139583 / 5687116 24911901 / 23542905 / 25950963 100%
rRNAs 7428 / 8202 / 8195 131763 / 212780 / 142748 0.53% / 0.90% / 0.55%
tRNAs 2035 / 4113 / 2552 21321 / 60177 / 38836 0.08% / 0.25% / 0.15%
snRNAs 2998 / 3697 / 3697 28552 / 23286 / 32047 0.01% / 0.09% / 0.12%
snoRNAs 793 / 781 / 855 1474 / 1375 / 1543 0.0059% / 0.0058% / 0.0059%
scRNAs 131 / 123 / 175 2322 / 1202 / 2059 0.0093% / 0.0051% / 0,0079%
Exons 229061 / 161711 / 139120 1075206 / 756268 / 669788 4.3% / 3.2% / 2.6%
Repeat-associated sequences 13748 / 14702 / 12556 85629 / 80407 / 73632 0.34% / 0.34% / 0.28%
Unannotated reads 5610243 / 5946254 / 5519967 23565634 / 22407410 / 24990310 94.5958% / 95.111% / 96.2862%
  1. *Sample 1, sample 2, sample 3.