Table 1 Annotations of the clean reads from three cabbage samples
Category | Unique reads S1/S2/S3* | Total reads S1/S2/S3* | Percent (%) of total reads S1/S2/S3* |
|---|---|---|---|
Clean reads | 5866438 / 6139583 / 5687116 | 24911901 / 23542905 / 25950963 | 100% |
rRNAs | 7428 / 8202 / 8195 | 131763 / 212780 / 142748 | 0.53% / 0.90% / 0.55% |
tRNAs | 2035 / 4113 / 2552 | 21321 / 60177 / 38836 | 0.08% / 0.25% / 0.15% |
snRNAs | 2998 / 3697 / 3697 | 28552 / 23286 / 32047 | 0.01% / 0.09% / 0.12% |
snoRNAs | 793 / 781 / 855 | 1474 / 1375 / 1543 | 0.0059% / 0.0058% / 0.0059% |
scRNAs | 131 / 123 / 175 | 2322 / 1202 / 2059 | 0.0093% / 0.0051% / 0,0079% |
Exons | 229061 / 161711 / 139120 | 1075206 / 756268 / 669788 | 4.3% / 3.2% / 2.6% |
Repeat-associated sequences | 13748 / 14702 / 12556 | 85629 / 80407 / 73632 | 0.34% / 0.34% / 0.28% |
Unannotated reads | 5610243 / 5946254 / 5519967 | 23565634 / 22407410 / 24990310 | 94.5958% / 95.111% / 96.2862% |