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Table 2 T. bernacchii unigene BLAST comparison against 9 teleost fish

From: De novo assembly and characterization of tissue specific transcriptomes in the emerald notothen, Trematomus bernacchii

Species

Sequences available for subject species

T. bernacchiihit

e-Value < 10-3

T. bernacchiihit

e-Value < 10-10

Notothenia coriiceps

34,371

19,235

15,861

Chaenocephalus aceratus

17,233

14,533

10,138

Pleuragramma antarcticum

19,945

16,822

10,033

Gasterosteus aculeatus

27,576

9,056

8,010

Takifugu rubripes

47,841

8,539

7,541

Oryzias latipes

24,674

8,686

7,630

Tetraodon nigroviridis

23,118

8,382

7,393

Oreochromis niloticus

26,763

9,116

8,066

Danio rerio

43,309

8,972

7,800

  1. BLASTx searches were conducted for Gasterosteus aculeatus, Takifugu rubripes, Oryzias latipes, Tetraodon nigroviridis, Oreochromis niloticus, and Danio rerio; BLASTn searches were conducted for: Notothenia coriiceps, Chaenocephalus aceratus, and Pleuragramma antarcticum, due to a lack of available protein databases.
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BMC Genomics

ISSN: 1471-2164

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