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Table 1 Summary of 454 sequencing data

From: Transcriptional responses to temperature and low oxygen stress in Atlantic salmon studied with next-generation sequencing technology

  Temperature Hypoxia
  13°C (EH1) 19°C (EH2) Normal O2 Low O2
Tissue Liver Liver Liver Liver
Individuals 6 6 9 9
Method SSH library SSH library Normalized library Normalized library
Sequencing FLX 454 GS-titanium FLX 454 GS-titanium FLX 454 GS-titanium FLX 454 GS-titanium
Platform CEES, UiO CEES, UiO LGC Genomics, Munich LGC Genomics, Munich
Reads 334403 439322 375347 401270
All contigs 14325 5659 10827 11478
Large contigs 2289 1790 7817 8498
IPA input >50 reads 754 1229 1466 1591
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