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Table 2 Fusions involving genes that partner in more than one fusion

From: Exploration of the gene fusion landscape of glioblastoma using transcriptome sequencing and copy number data

Sample

5′ partner gene

Genomic location

3′ partner gene

Genomic location

TCGA-06-5856-01A

TSFM

chr12

58180073

IFNG

chr12

68549194

TCGA-28-5207-01A

TSFM

chr12

58191066

TJAP1

chr6

43473030

TCGA-19-2624-01A

PPM1H

chr12

63182005

MDM2

chr12

69202987

TCGA-06-5856-01A

C12orf49

chr12

117175594

MDM2

chr12

69229608

TCGA-27-1835-01A

FGFR3

chr4

1808660

TACC3

chr4

1741428

TCGA-76-4925-01A

FGFR3

chr4

1808660

TACC3

chr4

1739324

TCGA-74-6578 (SN187)

FGFR3

chr4

1808661

TACC3

chr4

1737458

TCGA-06-0129-01A

FRS2

chr12

69864309

KIF5A

chr12

57957221

TCGA-41-2571-01A

FRS2

chr12

69864309

DTX3

chr12

58002302

TCGA-06-0141-01A

GIGYF2

chr2

233562102

ECEL1

chr2

233345866

TCGA-28-2499-01A

GIGYF2

chr2

233613791

PPP1R7

chr2

242107151

TCGA-06-0187-01A

HMGA2

chr12

66232348

NUP107

chr12

69109406

TCGA-06-0686-01A

NUP107

chr12

69096563

RP11-123O10

chr12

67302585

TCGA-14-1034-02B

ADAMTS17

chr15

100589061

LPAR1

chr9

113638001

TCGA-06-0129-01A

NAA15

chr4

140222984

LPAR1

chr9

113638001

TCGA-06-0125-01A

ARID1A

chr1

27094489

RNF31

chr14

24624365

TCGA-06-0125-02A

ARID1A

chr1

27094489

RNF31

chr14

24624365

TCGA-28-2514-01A

ARID1A

chr1

27024031

BEND5

chr1

49202124

TCGA-19-2619-01A

BCAN

chr1

156628525

NTRK1

chr1

156844697

TCGA-06-5411-01A

NFASC

chr1

204951147

NTRK1

chr1

156844362

TCGA-06-0157-01A

NFASC

chr1

204797909

SOX13

chr1

204082042

TCGA-06-0210-01A

NFASC

chr1

204797910

PRELP

chr1

203452296

TCGA-12-1597-01B

NFASC

chr1

204951147

RTN3

chr11

63525627

TCGA-06-5418-01A

CEP85L

chr6

118802941

ROS1

chr6

117641192

TCGA-14-2554-01A

CEP85L

chr6

118953615

SYTL3

chr6

159166511

TCGA-06-2559-01A

CTDSP2

chr12

58240154

LOC100422737

chr6

107172534

TCGA-41-2571-01A

CTDSP2

chr12

58240154

C12orf10

chr12

53699691

TCGA-19-2624-01A

EGFR

chr7

55087057

PPM1H

chr12

63195939

TCGA-28-5209-01A

EGFR

chr7

55268105

PSPHP1

chr7

55840873

TCGA-27-1837-01A

EGFR

chr7

55268106

SEPT14

chr7

55863785

TCGA-28-2513-01A

EGFR

chr7

55268106

SEPT14

chr7

55863785

TCGA-32-5222-01A

EGFR

chr7

55268106

SEPT14

chr7

55863785

TCGA-12-5299-01A

EGFR

chr7

55087057

RP11-436 F9

chr7

54414986

TCGA-06-0219-01A

EGFR

chr7

55240816

RP11-745C15.2

chr7

54860605

TCGA-12-3653-01A

EGFR

chr7

55269474

RP11-745C15.2

chr7

54850284

TCGA-12-3652-01A

VOPP1

chr7

55639963

RP11-745C15.2

chr7

54850800

TCGA-32-2638-01A

LANCL2

chr7

55433921

RP11-745C15.2

chr7

54850800

SN161

LANCL2

chr7

55469013

RP11-745C15.2

chr7

54872357

TCGA-06-0211-01A

LANCL2

chr7

55433921

GS1-18A18

chr7

54643985

TCGA-06-0211-01B

LANCL2

chr7

55433921

GS1-18A18

chr7

54643985

TCGA-06-0211-01A

LANCL2

chr7

55479782

SEPT14

chr7

55886916

TCGA-06-0211-01B

LANCL2

chr7

55479782

SEPT14

chr7

55886916

TCGA-28-2513-01A

LANCL2

chr7

55433922

SEPT14

chr7

55914330

TCGA-14-0817-01A

LANCL2

chr7

55469012

PSPH

chr7

56082822

TCGA-28-5209-01A

LANCL2

chr7

55433921

RP11-310H4

chr7

55714590

TCGA-14-1829-01A

SEC61G

chr7

54823471

RP11-310H4

chr7

55727802

TCGA-06-0211-02A

SEC61G

chr7

54825187

EGFR

chr7

55224225

SN159

SEC61G

chr7

51654097

UAR

chr7

54821716

TCGA-06-0211-01B

MRPS17

chr7

56019622

RP11-436 F9

chr7

54411333

TCGA-06-5856-01A

XRCC6BP1

chr12

58335421

SRRM4

chr12

119583185

TCGA-06-0138-01A

YEATS4

chr12

69764754

XRCC6BP1

chr12

58339410

TCGA-26-5135-01A

SLC16A7

chr12

59990016

RP11-362 K2.2

chr12

59206195

TCGA-02-2485-01A

MARS

chr12

57898081

RP11-362 K2.2

chr12

59195041

TCGA-74-6583 (SN214)

MON2

chr12

62981936

MARS

chr12

57883989

TCGA-74-6583 (SN214)

SLC35E3

chr12

69145972

UAR

chr12

68489752

SN238

YEATS4

chr12

69753803

SLC35E3

chr12

69152935

SN161

PIK3C2B

chr1

204426856

DSTYK

chr1

205119924

SN195-1

PLEKHA6

chr1

204320007

PIK3C2B

chr1

204439018

SN218

ZNF713

chr7

55991300

UAR

chr7

56082944

TCGA-74-6573 (SN154)

ZNF713

chr7

55980418

UAR

chr7

55945274