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Table 2 Summary of annotations of the P. bretschneideri unigenes

From: Transcriptome profiling of fruit development and maturation in Chinese white pear (Pyrus bretschneideri Rehd)

 

Sequences (n)

Annotations (n)

Functional classification

All assembled unigenes

90,227

-

-

Gene annotations against NR plant proteins

61,624

29,942

-

Gene annotations against NR Arabidopsis proteins

27,152

36,977

 

Unique gene annotations against NR

61,636

61,636

 

Gene annotations against UniProt

40,796

40,796

-

Gene annotations against InterPro

32,098

56,450

4,264 domains/families

Gene annotations against Pfam

30,985

37,194

3,406 domains/families

Gene annotations against COG

17,008

33,205

25 categories

Gene annotations against KEGG

31,215

31,215

121 pathways

GO annotations for NR protein hits

132,166

98,774

3 main categories, 44 sub-categories

All annotated Unigenes

62,077

-

-