Skip to main content

Table 2 Summary of annotations of the P. bretschneideri unigenes

From: Transcriptome profiling of fruit development and maturation in Chinese white pear (Pyrus bretschneideri Rehd)

  Sequences (n) Annotations (n) Functional classification
All assembled unigenes 90,227 - -
Gene annotations against NR plant proteins 61,624 29,942 -
Gene annotations against NR Arabidopsis proteins 27,152 36,977  
Unique gene annotations against NR 61,636 61,636  
Gene annotations against UniProt 40,796 40,796 -
Gene annotations against InterPro 32,098 56,450 4,264 domains/families
Gene annotations against Pfam 30,985 37,194 3,406 domains/families
Gene annotations against COG 17,008 33,205 25 categories
Gene annotations against KEGG 31,215 31,215 121 pathways
GO annotations for NR protein hits 132,166 98,774 3 main categories, 44 sub-categories
All annotated Unigenes 62,077 - -