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Table 3 Thirty most frequently occurring InterPro domains/families in the P. bretschneideri unigenes

From: Transcriptome profiling of fruit development and maturation in Chinese white pear (Pyrus bretschneideri Rehd)

Conserved domain/family Accession ID Sequences (n) Rank
Protein kinase, catalytic domain IPR000719 1436 1
Serine/threonine-protein kinase-like domain IPR017442 958 2
Leucine-rich repeat IPR001611 890 3
Serine/threonine-protein kinase domain IPR002290 699 4
Serine/threonine-protein kinase, active site IPR008271 617 5
Pentatricopeptide repeat IPR002885 590 6
Tyrosine-protein kinase, catalytic domain IPR020635 589 7
Protein kinase, ATP binding site IPR017441 515 8
Serine-threonine/tyrosine-protein kinase IPR001245 510 9
RNA recognition motif domain IPR000504 351 10
WD40 repeat, subgroup IPR019781 348 11
Zinc finger, RING-type IPR001841 344 12
Cytochrome P450 IPR001128 337 13
WD40-repeat-containing domain IPR017986 332 14
NB-ARC IPR002182 315 15
WD40 repeat 2 IPR019782 309 16
WD40 repeat IPR001680 305 17
Zinc finger, C3HC4 RING-type IPR018957 250 18
Myb, DNA-binding IPR014778 207 19
Leucine-rich repeat-containing N-terminal, type 2 IPR013210 194 20
HTH transcriptional regulator, Myb-type, DNA-binding IPR017930 187 21
SANT domain, DNA binding IPR001005 181 22
EF-HAND 2 IPR018249 177 23
F-box domain, cyclin-like IPR001810 165 24
Cytochrome P450, E-class, group I IPR002401 163 25
EF-Hand 1, calcium-binding site IPR018247 162 26
Tetratricopeptide repeat-containing IPR013026 161 27
WD40 repeat, conserved site IPR019775 156 28
Ankyrin repeat-containing domain IPR020683 152 29
Helicase, superfamily 1/2, ATP-binding domain IPR014021 148 30