Table 3 Thirty most frequently occurring InterPro domains/families in the P. bretschneideri unigenes
Conserved domain/family | Accession ID | Sequences (n) | Rank |
|---|---|---|---|
Protein kinase, catalytic domain | IPR000719 | 1436 | 1 |
Serine/threonine-protein kinase-like domain | IPR017442 | 958 | 2 |
Leucine-rich repeat | IPR001611 | 890 | 3 |
Serine/threonine-protein kinase domain | IPR002290 | 699 | 4 |
Serine/threonine-protein kinase, active site | IPR008271 | 617 | 5 |
Pentatricopeptide repeat | IPR002885 | 590 | 6 |
Tyrosine-protein kinase, catalytic domain | IPR020635 | 589 | 7 |
Protein kinase, ATP binding site | IPR017441 | 515 | 8 |
Serine-threonine/tyrosine-protein kinase | IPR001245 | 510 | 9 |
RNA recognition motif domain | IPR000504 | 351 | 10 |
WD40 repeat, subgroup | IPR019781 | 348 | 11 |
Zinc finger, RING-type | IPR001841 | 344 | 12 |
Cytochrome P450 | IPR001128 | 337 | 13 |
WD40-repeat-containing domain | IPR017986 | 332 | 14 |
NB-ARC | IPR002182 | 315 | 15 |
WD40 repeat 2 | IPR019782 | 309 | 16 |
WD40 repeat | IPR001680 | 305 | 17 |
Zinc finger, C3HC4 RING-type | IPR018957 | 250 | 18 |
Myb, DNA-binding | IPR014778 | 207 | 19 |
Leucine-rich repeat-containing N-terminal, type 2 | IPR013210 | 194 | 20 |
HTH transcriptional regulator, Myb-type, DNA-binding | IPR017930 | 187 | 21 |
SANT domain, DNA binding | IPR001005 | 181 | 22 |
EF-HAND 2 | IPR018249 | 177 | 23 |
F-box domain, cyclin-like | IPR001810 | 165 | 24 |
Cytochrome P450, E-class, group I | IPR002401 | 163 | 25 |
EF-Hand 1, calcium-binding site | IPR018247 | 162 | 26 |
Tetratricopeptide repeat-containing | IPR013026 | 161 | 27 |
WD40 repeat, conserved site | IPR019775 | 156 | 28 |
Ankyrin repeat-containing domain | IPR020683 | 152 | 29 |
Helicase, superfamily 1/2, ATP-binding domain | IPR014021 | 148 | 30 |