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Table 3 Statistics of DGE sequencing of Anthurium leaves under low temperature

From: De novo characterization of the Anthuriumtranscriptome and analysis of its digital gene expression under cold stress

Summary

 

Control

1 h

5 h

24 h

Raw data

Total

4,755,703

4,867,906

4,600,240

4,886,350

Raw data

Distinct tag

559,286

787,594

729,441

563,310

Clean tag

Total number

4,362,459

4,395,028

4,198,701

4,491,953

Clean tag

Distinct tag number

175,356

323,724

334,730

178,601

All tag mapping to gene

Total number

1,914,702

1,580,825

1,327,437

2,008,977

All tag mapping to gene

Total % of clean tag

43.89%

35.97%

31.62%

44.72%

All tag mapping to gene

Distinct tag number

51,341

41,139

57,996

49,116

All tag mapping to genee

Distinct tag % of clean tag

29.28%

12.71%

17.33%

27.50%

Unambiguous tag mapping to gene

Total number

1,906,521

1,569,945

1,315,834

2,001,497

Unambiguous tag mapping to gene

Total % of clean tag

43.70%

35.72%

31.34%

44.56%

Unambiguous tag mapping to gene

Distinct Tag number

51,026

40,805

57,541

48,784

Unambiguous tag mapping to gene

Distinct Tag % of clean tag

29.10%

12.60%

17.19%

27.31%

All tag-mapped genes

number

19,417

17,817

21,352

19,376

All tag-mapped genes

% of ref genes

43.75%

40.14%

48.11%

43.66%

Unambiguous tag-mapped Genes

number

19,287

17,674

21,195

19,217

Unambiguous tag-mapped Genes

% of ref genes

43.46%

39.82%

47.76%

43.30%

Unknown tag

Total number

2,447,757

2,814,203

2,871,264

2,482,976

Unknown tag

Total % of clean tag

56.11%

64.03%

68.38%

55.28%

Unknown tag

Distinct Tag number

124,015

282,585

276,734

129,485

Unknown tag

Distinct Tag % of clean tag

70.72%

87.29%

82.67%

72.50%