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Figure 2 | BMC Genomics

Figure 2

From: The genome-wide binding profile of the Sulfolobus solfataricustranscription factor Ss-LrpB shows binding events beyond direct transcription regulation

Figure 2

In vitro binding analysis to fragments representing ChIP-enriched genomic regions. Overview of EMSAs that yield specific, fast migrating complexes. Targets are named according to the gene closest to or overlapping the ChIP peak (see Additional file 1: Supplementary Dataset S1). The EMSA for the Sso2131 target is not shown as this interaction has been studied before [29]. Protein concentrations, given in the upper left EMSA, are identical for all EMSAs except for Sso1433, in which an additional concentration is tested (640 nM). Positions of free DNA (F), Ss-LrpB-DNA complexes (B, B1, B2) and single stranded DNA (SS) are indicated.

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BMC Genomics

ISSN: 1471-2164

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