Table 6 Pathway and pathway pair classifiers
From: Iterative feature removal yields highly discriminative pathways
Single Pathways | Pathway Pairs | Sparse SVM | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|
Data Set | IFR Iters | Val.( μ/σ) | Test | Top5 | Val.( μ/σ) | Test | Top5 | Val.( μ/σ) | Test | Top5 |
Lung | 30 | 95.5/7.0 | 99.3 | 96.9 | 98.8/3.7 | 98.0 | 98.8 | 99.8/1.7 | 98.0 | 96.8 |
Influenza 11-14 | 30 | 98.6/2.9 | 96.0 | 95.5 | 99.0/2.3 | 97.3 | 97.6 | 98.9/2.3 | 92.0 | 92.8 |
Prostate | 30 | 78.9/14.2 | 79.4 | 77.6 | 81.8/14.0 | 79.4 | 78.2 | 91.0/5.7 | 79.4 | 80.6 |
BCell Lymph. | 20 | 89.5/12.3 | 83.3 | 75.0 | 91.8/12.4 | 83.3 | 78.3 | 87.8/12.4 | 83.3 | 80.0 |