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Figure 4 | BMC Genomics

Figure 4

From: Phylogenetic and transcriptional analysis of an expanded bZIP transcription factor family in Phytophthora sojae

Figure 4

Transcription patterns of P. sojae bZIP candidates. The heat map shows gene transcription patterns during 10 stages of the life cycle: mycelia (MY), zoosporangia (SP), zoospores (ZO), cysts (CY), germinating cysts (GC), and samples from 1.5, 3, 6, 12, and 24 h post-inoculation of soybean leaves (IF1.5 h to IF24 h). The color bar represents log2 of gene transcripts per million reads (TPM) values, ranging from dark blue (0) to red (8.5). Black represents no expression. “**” following protein ID indicates that gene expression was not detected in all 10 libraries, and “*” denotes ambiguous data because of other identical sequences [31]. Transcript level data were collected into 11 clusters using HCL methods and MeV software, and marked in the column “cluster” (A to J). Column “H2O2 response” shows the patterns of transcriptional changes following H2O2 treatments at 30 min, 1 h, and 2 h, respectively. “U” and “D” refer to >1.2 fold elevation or -reduction respectively that are significant with a t-test P-value < 0.05, while “-“ means no significant change.

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