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Table 1 Summary of the biotype assignment of genes expressed in the two cell lines

From: Translational profiling in childhood acute lymphoblastic leukemia: no evidence for glucocorticoid regulation of mRNA translation

 

C7H2

NALM6

Detectable*:

protein_coding

10318

11129

19229

processed_transcript

236

297

1010

sence_intronic

32

55

353

misc_RNA

156

217

784

snRNA

111

176

969

miRNA

42

56

196

snoRNA

205

264

745

rRNA

51

82

276

scRNA_pseudogene

213

232

620

Mt_tRNA_presudogene

31

44

277

Other biotypes

2479

3737

16866

Total number of genes:

13874

16289

41325

  1. Summary of the biotype assignment of genes expressed in the two cell lines and of all genes detectable on the microarray. Other biotypes include pseudogene, lincRNA, antisense, polymorphic_pseudogene, non_coding, IG_V_pseudogene, ncrna_host, IG_C_gene, IG_J_gene, IG_V_gene, TR_J_gene, TR_V_gene, TR_V_pseudogene, TR_C_gene, TR_J_pseudogene, IG_C_pseudogene, IG_D_gene, sense_overlapping, 3prime_overlapping_ncrna, snoRNA_pseudogene, rRNA_pseudogene, tRNA_pseudogene, snRNA_pseudogene, miRNA_pseudogene, misc_RNA_pseudogene. Total number of genes annotated by Ensembl version 67: 51455. *) Detectable on the microarray.