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Table 6 Significant chromosomal Regions with TAS using a pleiotropic GWAS model (FDR = 0.05)

From: Genome-wide analysis of porcine backfat and intramuscular fat fatty acid composition using high-density genotyping and expression data

SSC

Trait

Chromosomal region (Mb)

N° of TAS

P-value

a(SE)

1

C16:0BF

81.21-84.71

65

1.1 × 10-5

−0.52 (0.15)

C16:0IMF

−0.62 (0.15)

4

C16:0BF

94.00-99.01

16

3.2 × 10-4

−0.50 (0.14)

C16:0IMF

−0.45 (0.15)

 

C18:2BF

92.05-92.44

5

1.8 × 10-5

0.83 (0.19)

C18:2IMF

0.90 (0.29)

8

C16:0BF

83.84-130.62

115

1.0 × 10-11

−1.00 (0.10)

C16:0IMF

−0.71 (0.11)

 

C16:1(n-7)BF

99.33-99.49

3

1.1 × 10-9

0.13 (0.03)

C16:1(n-7)IMF

0.21 (0.04)

 

C16:1(n-7)BF

110.90-126.88

34

1.1 × 10-11

−0.16 (0.02)

 

C16:1(n-7)IMF

   

−0.23 (0.04)

  1. a (SE): additive effect (standard error).