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Table 3 Different components of the raw reads in each sample

From: Analysis of sea-island cotton and upland cotton in response to Verticillium dahliaeinfection by RNA sequencing

Summary

Clean reads only

Only adaptor

Containing N

Low quality

1

12230124(99.39%)

54281(0.44%)

788(0.01%)

19459(0.16%)

2

11875055(99.45%)

45599(0.38%)

0

19899(0.17%)

3

11764630(99.38%)

53254,0.45%)

745(0.01%)

19561(0.17%)

4

12511454(99.42%)

51023(0.41%)

0

21851(0.17%)

5

12167879(99.42%)

49895(0.41%)

749(0.01%)

20211(0.17%)

6

12420918(99.48%)

49511,0.40%)

1094(0.01%)

14766(0.12%)

  1. Note: 1: KV1/D; 2: XH/D; 3: ZKV1/V; 4:XH/V; 5:KV1/U; and 6: XH/U.