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Table 7 Overrepresentation of GO-terms differentially expressed between Taiwanese and European A. crassus

From: The transcriptome of the invasive eel swimbladder nematode parasite Anguillicola crassus

Category

GO.ID

Term

Number annotated

Number significant

Expected

p.value

molecular function

GO:0016453

C-acetyltransferase activity

3

3

0.37

0.0018

 

GO:0003824

catalytic activity

158

27

19.50

0.0079

 

GO:0016746

transferase activity, transferring acylgroups

8

4

0.99

0.0097

 

GO:0003682

chromatin binding

2

2

0.25

0.0149

 

GO:0003985

acetyl-CoA C-acetyltransferase activity

2

2

0.25

0.0149

 

GO:0008061

chitin binding

2

2

0.25

0.0149

 

GO:0003713

transcription coactivator activity

6

3

0.74

0.0268

 

GO:0005543

phospholipid binding

6

3

0.74

0.0268

 

GO:0004090

carbonyl reductase (NADPH) activity

3

2

0.37

0.0412

 

GO:0008289

lipid binding

12

4

1.48

0.0473

 

GO:0016853

isomerase activity

12

4

1.48

0.0473

biological process

GO:0016126

sterol biosynthetic process

5

4

0.60

0.00081

 

GO:0044281

small molecule metabolic process

107

22

12.80

0.00105

 

GO:0048732

gland development

9

5

1.08

0.00169

 

GO:0006694

steroid biosynthetic process

10

5

1.20

0.00307

 

GO:0006338

chromatin remodeling

4

3

0.48

0.00586

 

GO:0006695

cholesterol biosynthetic process

4

3

0.48

0.00586

 

GO:0042180

cellular ketone metabolic process

57

13

6.82

0.00800

 

GO:0023051

regulation of signaling

29

8

3.47

0.01318

 

GO:0001822

kidney development

2

2

0.24

0.01399

 

GO:0006611

protein export from nucleus

2

2

0.24

0.01399

 

GO:0009953

dorsal/ventral pattern formation

2

2

0.24

0.01399

 

GO:0048581

negative regulation of post-embryonic development

2

2

0.24

0.01399

 

GO:0051124

synaptic growth at neuromuscular junction

2

2

0.24

0.01399

 

GO:0070050

neuron homeostasis

2

2

0.24

0.01399

 

GO:0019752

carboxylic acid metabolic process

54

12

6.46

0.01417

 

GO:0008152

metabolic process

268

37

32.06

0.01595

 

GO:0019219

regulation of nucleobase-containing compound metabolic process

42

10

5.02

0.01617

 

GO:0006355

regulation of transcription,DNA-dependent

30

8

3.59

0.01637

 

GO:0010033

response to organic substance

62

13

7.42

0.01729

 

GO:0019953

sexual reproduction

44

10

5.26

0.02265

 

GO:0048747

muscle fiber development

6

3

0.72

0.02461

 

GO:0032787

monocarboxylic acid metabolic process

21

6

2.51

0.02763

 

GO:0051171

regulation of nitrogen compound metabolic process

52

11

6.22

0.02827

 

GO:0048545

response to steroid hormonestimulus

16

5

1.91

0.03065

 

GO:0048609

multicellular organismal reproductive process

60

12

7.18

0.03331

 

GO:0009966

regulation of signal transduction

22

6

2.63

0.03462

 

GO:0031325

positive regulation of cellularmetabolic process

28

7

3.35

0.03565

 

GO:0009308

amine metabolic process

41

9

4.90

0.03874

 

GO:0002026

regulation of the force of heart contraction

3

2

0.36

0.03877

 

GO:0007595

lactation

3

2

0.36

0.03877

 

GO:0030518

intracellular steroid hormonereceptor signaling pathway

3

2

0.36

0.03877

 

GO:0034612

response to tumor necrosis factor

3

2

0.36

0.03877

 

GO:0035071

salivary gland cell autophagic cell death

3

2

0.36

0.03877

 

GO:0035220

wing disc development

3

2

0.36

0.03877

 

GO:0043628

ncRNA 3’-end processing

3

2

0.36

0.03877

 

GO:0045540

regulation of cholesterol biosynthetic process

3

2

0.36

0.03877

 

GO:0051091

positive regulation of sequence-specific DNA binding transcription factor activity

3

2

0.36

0.03877

 

GO:0051289

protein homotetramerization

3

2

0.36

0.03877

 

GO:0002165

instar larval or pupal development

7

3

0.84

0.03951

 

GO:0007589

body fluid secretion

7

3

0.84

0.03951

 

GO:0048872

homeostasis of number of cells

7

3

0.84

0.03951

 

GO:0060047

heart contraction

7

3

0.84

0.03951

 

GO:0065008

regulation of biological quality

83

15

9.93

0.04013

 

GO:0006066

alcohol metabolic process

35

8

4.19

0.04124

 

GO:0050794

regulation of cellular process

154

24

18.42

0.04125

 

GO:0006357

regulation of transcription fromRNA polymerase II promoter

12

4

1.44

0.04276

 

GO:0006351

transcription, DNA-dependent

42

9

5.02

0.04489

 

GO:0007276

gamete generation

42

9

5.02

0.04489

 

GO:0005975

carbohydrate metabolic process

36

8

4.31

0.04827

cellular compartment

GO:0031967

organelle envelope

47

12

5.49

0.0031

 

GO:0005740

mitochondrial envelope

29

8

3.38

0.0112

 

GO:0005643

nuclear pore

2

2

0.23

0.0133

 

GO:0005739

mitochondrion

93

17

10.85

0.0173

 

GO:0031966

mitochondrial membrane

28

7

3.27

0.0312

 

GO:0005902

microvillus

3

2

0.35

0.0369

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BMC Genomics

ISSN: 1471-2164

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