Whole transcriptome characterization of the effects of dehydration and rehydration on Cladonia rangiferina, the grey reindeer lichen

Table 2 Filtering parameters for all comparisons and the amount of differentially expressed transcripts

Comparison	FC	logFC	P type	P	Total	Up	Down
W15m vs. dry	32	5	FDR	0.001	1108	531	577
W15m vs. wet	32	5	FDR	0.001	931	348	583
W30m vs. dry	32	5	FDR	0.001	572	442	130
W30m vs. wet	8	3	FDR	0.01	560	402	158
W1h vs. dry	32	5	FDR	0.001	595	398	197
W1h vs. wet	8	3	P value	0.001	162	80	82
Wet vs. dry	16	4	FDR	0.001	675	589	86
D1h vs. dry	16	4	FDR	0.001	980	599	381
D1h vs. wet	16	4	FDR	0.001	919	393	526
D3h vs. dry	32	5	FDR	0.001	645	430	215
D3h vs. wet	32	5	FDR	0.001	614	266	348
D6h vs. dry	32	5	FDR	0.001	663	462	201
D6h vs. wet	32	5	FDR	0.001	624	317	307

FC = fold change, logFC = 2-logarithmic fold change, P = p value, FDR = false discovery rate, Total = total amount of differently expressed transcripts, Up = amount of up-regulated transcripts, Down = amount of down-regulated transcripts.

ISSN: 1471-2164