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Figure 6 | BMC Genomics

Figure 6

From: VTCdb: a gene co-expression database for the crop species Vitis vinifera (grapevine)

Figure 6

Predicted module involved in flavonoid, amino acid and related metabolism (module All _HCCA_181). (A) Output for module ‘All _HCCA_181’, which contains 74 nodes and 152 edges, includes genes predominantly associated with general flavonoid, aromatic amino acid metabolic pathways and transport. Sub-network of putative grapevine MYBPA1 and two unknown genes extracted from module ‘All _HCCA_181’ within a neighbourhood distance of 1 are highlighted in red, green and yellow boxes, respectively. (B) Network representation of truly significant and highly enriched GO:BP terms related to flavonoid, aromatic amino acid and terpenoid metabolism are highlighted in purple boxes. Other enriched GO terms were removed from presentation for clarity. (C) Expression specificity of module ‘All _HCCA_181’ showing experiments in which the probesets (70% or greater) demonstrated specific expression (Std2Gx > 1.0). PFS, post fruitset; FS, fruitset; V, veraison, H, harvest.

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