Figure 2

Functional classification of the primary needle transcriptome of Pinus monticola assembled de novo from RNA-seq data based on gene ontology (GO). Subcategories of cellular component (CC), molecular function (MF), and biological process (BP) are indicated as: CC-1, membrane; CC-2, organelle; CC-3, cell; CC-4, macromolecular complex; CC-5, extracellular region; CC-6, membrane-enclosed lumen; CC-7, extracellular matrix; CC-8, symplast; CC-9, cell junction; CC-10, virion; CC11, synapse; MF-1, binding; MF-2, catalytic activity; MF-3, transporter activity; MF4, electron carrier activity; MF-5, structural molecule activity; MF-6, nucleic acid binding transcription factor activity; MF-7, receptor activity; MF-8, antioxidant activity; MF-8, molecular transducer activity; MF-10, enzyme regulator activity; MF-11, nutrient reservoir activity; MF-12, protein binding transcription factor activity; MF-13, protein tag; MF-14, metallochaperone activity; MF-15, translation regulator activity; BP-1, metabolic process; BP-2, cellular process; BP-3, response to stimulus; BP-4, developmental process; BP-5, biological regulation; BP-6, multicellular organismal process; BP-7, localization; BP-8, signalling; BP-9, reproduction; BP-10, multi-organism process; BP-11, cellular component organization or biogenesis; BP-12, growth; BP-13, death; BP-14, immune system process; BP-15, cell proliferation; BP-16, rhythmic process; BP-17, biological adhesion; BP-18, carbon utilization; BP-19, nitrogen utilization; BP-20, locomotion; BP-21, cell killing; BP-22, pigmentation; and BP-23, viral reproduction.