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Figure 5 | BMC Genomics

Figure 5

From: Comprehensive analysis of the Corynebacterium glutamicum transcriptome using an improved RNAseq technique

Figure 5

Analysis of ribosome binding sites in C. glutamicum. (a) Frequencies of purines (G or A) compared to frequencies of pyrimidines (T or C) within the first 20 bases (relative to the start codon) of 922 different 5′-UTRs. (b) Analysis of the spacing between the RBS and the start codon, based on all identified RBS motifs by Improbizer. (c) Information content within the identified RBS motif of C. glutamicum including three leading and lagging bases, a spacer of 1 - 7 nt, as well as the translational initiation codon. The y-axis shows the information content (measured in bits). The analysis is based on 673 RBS motifs identified with Improbizer within a spacing of 7 ± 3 nt only. The sequence logo was created with WebLogo[45].

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