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Table 1 Hemiascomycetous strains examined during this work

From: The drug:H+ antiporters of family 2 (DHA2), siderophore transporters (ARN) and glutathione:H+antiporters (GEX) have a common evolutionary origin in hemiascomycete yeasts

Species

Strain

Acronym

Phylogenetic complex

Speciation in relation to WGD

Coverage

Genome size (Mb)

Database

Saccharomyces cerevisiae

S288C

sace_a

Saccharomyces complex

Post

Complete

12.2

1

EC1118

sace_b

Post

24X

11.7

2

JAY291

sace_c

Post

165X

11.5

2

RM11-1A

sace_d

Post

10X

11.7

3

YJM789

sace_e

Post

10X

12.0

2

Saccharomyces paradoxus

NRRL Y-17217

sapa

Post

7.7X

11.9

4

Saccharomyces mikatae

IFO 1815

sami_a

Post

5.9X

11.5

5

IFO 1815

sami_b

Post

2.8X

10.8

6

Saccharomyces bayanus

623-6C

saba_a

Post

2.9X

11.9

7

MCYC 623

saba_b

Post

6.4X

11.5

8

Saccharomyces kudriavzevii

IFO 1802

saku

Post

3.4X

11.2

9

Saccharomyces castelli

NRRL Y-12630

saca

Post

3.9X

11.2

7

Candida glabrata

CBS138

cagl

Post

Complete

12.3

10

Kluyveromyces polysporus

DSM 70294

klpo

Post

7.8X

14.7

7

Zygosaccharomyces rouxii

CBS 732

zyro

Pre

Complete

9.8

10

Saccharomyces kluyveri

CBS3082

sakl

Pre

Complete

11.5

10

Kluyveromyces waltii

NRRL Y-12651

klwa

Pre

8X

10.9

10

Kluyveromyces thermotolerans

CBS6340

klth

Pre

Complete

10.4

10

Kluyveromyces lactis

CLIB210

klla

Pre

Complete

10.7

10

Eremothecium gossypii

ATCC10895

ergo

Pre

Complete

9.1

10

Candida albicans

SC5314

caal_a

CTG complex

Pre

10.4X

27.6

11

WO-1

caal_b

10X

21.7

11

Candida dubliniensis

CD36

cadu

11X

14.6

11

Candida tropicalis

MYA-3404

catr

10X

14.6

11

Candida parapsilosis

CDC 317

capa

9.2X

13.1

11

Lodderomyces elongisporus

NRLL YB-4239

loel

8.7X

15.5

11

Candida guilliermondii

ATCC 6260

cagu

12X

10.6

11

Debaryomyces hansenii

CBS767

deha

Complete

12.2

10

Pichia stipitis

CBS 6054

pist

-

15.4

12

Candida lusitaniae

ATCC 42720

calu

9X

12.1

11

Pichia pastoris

GS115

pipa

Early-divergent

Pre

20X

9.2

13

Yarrowia lipolytica

CLIB122

yali

Early-divergent

Pre

Complete

20.6

10

  1. Information regarding strain acronyms, the corresponding phylogenetic complex, phylogenetic position concerning the WGD event, genome coverage, estimated genome size and database from where the genome sequence was retrieved is shown.
  2. 1-http://downloads.yeastgenome.org/sequence/S288C_reference/orf_protein/orf_trans_all.fasta.gz.
  3. 2-http://www.ncbi.nlm.nih.gov/.
  4. 3-http://www.broadinstitute.org/annotation/genome/saccharomyces_cerevisiae.3.
  5. 4-http://downloads.yeastgenome.org/sequence/fungi/S_paradoxus/archive/MIT/orf_protein/.
  6. 5-http://downloads.yeastgenome.org/sequence/fungi/S_mikatae/archive/MIT/orf_protein/.
  7. 6-http://downloads.yeastgenome.org/sequence/fungi/S_mikatae/archive/WashU/orf_protein/.
  8. 7-http://wolfe.gen.tcd.ie/ygob/.
  9. 8-http://downloads.yeastgenome.org/sequence/fungi/S_bayanus/archive/MIT/orf_protein/.
  10. 9-http://downloads.yeastgenome.org/sequence/fungi/S_kudriavzevii/archive/WashU/orf_protein/.
  11. 10-http://www.genolevures.org/download.html#.
  12. 11-http://www.ebi.ac.uk/integr8.
  13. 12-http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz.
  14. 13-https://bioinformatics.psb.ugent.be/gdb/pichia/pipas_genes-1009.pep.
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BMC Genomics

ISSN: 1471-2164

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