A genome-wide scan for signatures of differential artificial selection in ten cattle breeds

BMC Genomics

Table 6 Most extended selection signatures

BTA	Breed	Start	End	SNP	Genes	Candidate genes mentioned in the text
4	BBB	68,372,478	72,954,413	71	26	NPY
6	FGV	32,267,848	42,353,432	199	26	ABCG2, MEPE, IBSP, LAP3, NCAPG, LCORL
6	MWF	36,697,298	42,548,023	146	22	ABCG2, MEPE, IBSP, LAP3, NCAPG, LCORL
6	DFV	68,581,139	72,640,834	119	23	PDGFRA, KIT, KDR
6	BBV	84,205,130	96,165,559	227	68	BTC, ANKRD17, CSN1S1, CSN2, CSN1S2, CSN3, IL8
9	GLW	40,644,068	58,813,449	314	47	SIM1
11	OBV	64,291,486	71,493,179	130	38	PROKR1, GFPT1, GMCL1, PCBP1, EHD3
17	IMB	56,144,286	56,591,720	7	8	CAMKK2, ATP2A2
18	RH	13,218,147	25,386,867	231	85	MC1R, NKD1, NOD2, SALL1
20	ABB	2,571,860	3,171,036	9	4	NPM1, FGF18

The most extended signature of each of the ten breeds (Breed) is shown. Bos taurus autosome (BTA), the position in bp (Start to End) and the number of SNPs (SNP) per signature are given. From all positional candidate genes within the respective signature (Genes) only genes mentioned in the text are listed.

ISSN: 1471-2164