Species | Approximate # | Estimated | Median †| Median †| GC | Source |
---|
| genome size | repeat content | exon length | intron length | content | |
---|
C.elegans
| 100Mb | 17% (16.5%) | 145bp | 69bp | 38% | [17, 18] |
P. pacificus
| 165Mb | 15.3% (17%) | 85bp | 141bp | 42% | [20, 25] |
A. suum
| 334Mb | 4.4% | 144bp | 907bp | 37.9% | [21, 40] |
B. malayi
| 95Mb | 16.5% (15%) | 140bp | 219bp | 30% | [22] |
B. xylophilus
| 69Mb | 22,5% | 183bp | 69bp | 40% | [25] |
M. incognita
| ∼200Mb | 36,7% | 136bp | 82bp | 31% | [24] |
T. spiralis
| 63Mb | 19.8% (18%) | 128bp | 283bp | 34% | [27] |
R. culicivorax
| >270Mb | 48.2% | 161bp | 405bp | 36% | this work |
- Repeat content of different nematode genomes appears not to be directly correlated with genome size. Re-calculation in selected genomes shows little deviance from published data (in parentheses) ∗and thus indicates the validity of our inference for R. culicivorax.
- ∗For B. xylophilus and M. incognita only reference data is given as the same programs were used for initial inference (see references); A. suum not re-calculated.
- #M. incognita genome size given as 86Mbp in [24] has been re-estimated to about 150Mbp (E. Danchin pers. comm.).
- ‡Median lengths for A. suum and T. spiralis were calculated in this work as these data are not given in the cited publications.