Table 2 List of additional genes under positive selection across the six Escherichia coli genomes using the M1a-M2a test
Gene | P-valuea | KOb | COG | Pathway | Enrichmentc | Function |
|---|---|---|---|---|---|---|
alaS | 0.000 | K01872 | J | ko00970 | 0.3094 | Alanyl-tRNA synthetase |
cobU | 0.046 | K02231 | H | ko00860 | 0.6536 | Bifunctional cobinamide kinase and cobinamide phosphate guanylyltransferase |
dacC | 0.024 | K07258 | M | ko00550 | 0.6806 | D-alanyl-D-alanine carboxypeptidase |
eutA | 0.000 | K04019 | E | ko00564 | 0.6025 | Reactivating factor for ethanolamine ammonia lyase |
fliC | 0.000 | K02406 | N | ko02020 | 0.1939 | Flagellar filament structural protein |
hchA | 0.000 | K05523 | R | - | - | Hsp31 molecular chaperone |
nfsA | 0.000 | K07734 | K | - | - | Nitroreductase A |
pgl | 0.000 | K07404 | G | ko00030 | 0.3210 | 6-phosphogluconolactonase |
yadB | 0.000 | K01894 | J | - | - | Glutamyl-Q tRNA synthetase |
yebN | 0.000 | - | S | - | - | Conserved inner membrane protein |
yddV | 0.000 | K13069 | T | - | - | Predicted diguanylate cyclase |
yfdF | 0.041 | - | - | - | - | Hypothetical protein |
ygfI | 0.013 | - | K | - | - | Putative DNA-binding transcriptional regulator |
ygeR | 0.000 | K12943 | M | - | - | Lipoprotein |