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Table 3 Loci preferentially expressed in 4 or more strains in FeHm-replete conditions

From: Comparison of transcription of the Haemophilus influenzae iron/heme modulon genes in vitro and in vivo in the chinchilla middle ear

  

Fold changec

Locusa

Descriptionb

R2866

10810

Rd

R2846

86-028NP

HI0006m

Formate dehydrogenase-N, alpha subunit FdnG

+7.58

+8.36

not ond

+1.44

+1.71

HI0007

Formate dehydrogenase-N, Fe-S beta subunit FdnH

+7.49

+6.00

+3.40

+1.21

+1.73

HI0008

Formate dehydrogenase-N, cytochrome B556 gamma subunit, FdnI

+7.47

+5.23

+3.20

ns

+1.76

HI0009

Formate dehydrogenase-N, accessory protein FdnE

+3.35

+3.43

+1.88

ns

+1.75

HI0185

Formaldehyde dehydrogenase, glutathione-dependent AdhC

+5.86

+4.01

+8.04

+12.18

+2.85

HI0343

Twin-arginine signal-peptide-binding chaperone NapD

+3.19

ns

+1.66

+1.78

+1.60

HI0344

Periplasmic nitrate reductase subunit NapA

+2.67

ns

not ond

+1.79

+1.62

HI0345

Periplasmic nitrate reductase, ferredoxin-type protein NapG

+4.47

ns

+1.88

+2.13

+1.91

HI0346

Periplasmic nitrate reductase, ferredoxin-type protein NapH

+3.37

+1.25

+1.93

+1.86

+1.71

HI0347

Periplasmic nitrate reductase, electron transfer subunit NapB

+4.77

ns

+1.90

+1.68

+2.17

HI0348

Periplasmic nitrate reductase, cytochrome C-type subunit NapC

+3.20

ns

+1.71

+1.69

+2.34

HI0980

DNA architectural protein Fis

+4.67

+2.56

+2.06

+1.66

+1.15

HI1066

Nitrite reductase complex, transmembrane protein NrfD

+6.34

+2.24

+1.88

+3.84

ns

HI1067

Nitrite reductase complex, Fe-S subunit NrfC

+6.99

+1.70

+1.52

+2.98

+3.53

HI1068

Nitrite reductase complex, periplasmic cytochrome subunit NrfB

+9.49

ns

+2.00

+4.75

+3.81

HI1069

Nitrite reductase complex, periplasmic cytochrome C552 subunit NrfA

+8.33

+2.53

+2.13

+5.11

+3.65

HI1078

Probable amino acid ABC transporter, ATP-binding protein

+1.88

+1.89

+1.52

+2.21

+1.16

HI1094

Cytochrome c-type biogenesis protein CcmF

+2.53

+1.60

+1.81

+1.63

+1.65

HI1384

Ferritin protein A1

+3.21

+2.01

+2.60

+1.62

+2.06

HI1385

Ferritin protein A2

+4.13

+2.24

+2.94

+1.58

+2.23

  1. aGene locus in Rd KW20.
  2. bName and description of the gene based upon annotation of Rd KW20, R2846 and R2866.
  3. c Fold change as determined from the microarray data. Numbers in italics are below the 1.5 fold threshold but have a p-value below the statistically significant threshold. Numbers in bold are above the 1.5 fold threshold but have a p-value above the statistically significant threshold. ns = non significant and below 1.5-fold threshold.
  4. dlocus not included on the Rd KW20 array but expression determined to be above 2 fold change in expression by Q-PCR.