Identification and characterisation of non-coding small RNAs in the pathogenic filamentous fungus Trichophyton rubrum

Table 1 Conservation level of snRNAs in T. rubrum and related dermatophytes

			Genome location
Name	Genes	Len^a	Chromosome	Start	End	Position	Conserved in dermatophytes (% sequence identity)	Accession
Trnc_3904	U1	196	supercont2.8	159538	159733	5′UTR	M. gypseum (98%), M. canis (98%), A. benhamiae (100%)	KC353306
Trnc_774	U2	201	supercont2.1	3545014	3545214	3′UTR	T. tonsurans (98%), T. equinum (98%), M. gypseum (97%), T. verrucosum (99%), M. canis (96%), A. benhamiae (99%)	KC353051
Trnc_1437	U4	264	supercont2.17	13253	15593	Intergenic	T. tonsurans (100%), T. equinum (100%), M. gypseum (99%), A. benhamiae (100%)	KC353100
Trnc_681	U5	211	supercont2.1	3061687	3061897	5′UTR	T. tonsurans (92%), T. equinum (92%), M. gypseum (95%), T. verrucosum (93%), M. canis (91%), A. benhamiae (100%)	KC353044
Trnc_1782	U6	104	supercont2.2	1801544	1801647	3′UTR	T. tonsurans (100%), M. gypseum (100%), M. canis (99%), A. benhamiae (100%)	KC353131

Len^a: the cDNA length of the snRNA. Conserved in dermatophytes (% sequence identity): the sequence identity of homologous snRNAs in other dermatophytes compared to T. rubrum; Accession is the accession number in GenBank.