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Table 5 The ncRNA candidates specifically expressed in dermatophytes

From: Identification and characterisation of non-coding small RNAs in the pathogenic filamentous fungus Trichophyton rubrum

    Genome location  
Name Lena Reads Chromosome Start End Position Accession
Trnc_817 188 323 supercont2.1 3719705 3719892 3′UTR KC353054
Trnc_733 174 1 supercont2.1 3371115 3371288 3′UTR KC353049
Trnc_2676 156 2 supercont2.4 110438 110593 3′UTR KC353213
Trnc_3999 178 5 supercont2.8 672734 672557 3′UTR KC353314
Trnc_1167 177 1 supercont2.11 544895 545071 3′UTR KC353076
Trnc_2448 161 1 supercont2.3 2123075 2122915 5′UTR KC353183
Trnc_4219 104 1 supercont2.9 449429 449532 5′UTR KC353335
Trnc_956 241 2 supercont2.10 559285 559525 5′UTR KC353063
Trnc_305 97 579 supercont2.1 1515685 1515781 Intron KC353018
Trnc_500 203 1 supercont2.1 2298649 2298447 Intron KC353035
Trnc_1792 251 1 supercont2.2 1856556 1856806 Intron KC353132
  1. Lena: the cDNA length of the ncRNAs; Accession is the accession number in GenBank. This table shows the lengths and genomic loci of ten sncRNAs that might be specifically expressed in dermatophytes. These ncRNAs were conserved in all six dermatophytes but have no homologues in NT.