Table 2 Positively selected genes along the Darwin’s finch lineage
Short gene name | Ensembl gene ID of chicken 1:1 ortholog | P-value that gene is under positive selection | Number of codon sites inferred to be under positive selection with p<0.1 |
|---|---|---|---|
FKBP6 | ENSGALG00000000837 | 0.045 | 0 |
MFF | ENSGALG00000003079 | 0.030 | 3 |
ASB6 | ENSGALG00000004378 | 0.048 | 3 |
SART3 | ENSGALG00000004887 | 0.026 | 1 |
UBP47 | ENSGALG00000005569 | 0.0080 | 0 |
TRAF7 | ENSGALG00000005767 | 0.021 | 1 |
XDH | ENSGALG00000008701 | 0.0036 | 1 |
E1BY77 | ENSGALG00000008909 | 0.0025 | 2 |
F1N8A7 | ENSGALG00000010043 | 0.0024 | 1 |
P2RY1 | ENSGALG00000010357 | 0.022 | 0 |
F1NDU4 | ENSGALG00000011096 | 0.026 | 0 |
PRKAG3 | ENSGALG00000011360 | 0.034 | 1 |
ANO10 | ENSGALG00000011513 | 0.0038 | 1 |
IGF2R | ENSGALG00000011621 | 0.031 | 0 |
F1NIP9 | ENSGALG00000012138 | 0.018 | 1 |
LRR1 | ENSGALG00000012230 | 0.044 | 1 |
C7orf25 | ENSGALG00000012333 | 0.020 | 0 |
Q9DEH4 | ENSGALG00000012495 | 0.0069 | 0 |
ARSK | ENSGALG00000014672 | 0.0061 | 1 |
F1NR67 (POU1F1) | ENSGALG00000015495 | 0.016 | 1 |
E1BV11 | ENSGALG00000016811 | 0.0038 | 1 |