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Table 1 Gene expression model with sRNA regulation

From: How reliable is the linear noise approximation of gene regulatory networks?

paramater

set(i)

set (ii)

k0[G]

0.024min-1µM

0.0024min-1µM

k dM

0.2min-1

0.2min-1

k s

1.5min-1

1.5min-1

k-1, k2

2min-1

2min-1

k 1

400(µM min)-1

4000(µM min)-1

k dS

0.2min-1

0.2min-1

k R

100(µM min)-1

1000(µM min)-1

  1. Kinetic parameters used for the gene expression model with sRNA regulation, scheme (7), as discussed in the main text. The volume is fixed to 10-15l with total enzyme concentration of 0.1µM for parameter set (i) and 0.01µM for parameter set (ii) corresponding to 60 and 6 enzyme molecules, respectively. Note that [G] denotes the constant gene concentration.