From: MHC2SKpan: a novel kernel based approach for pan-specific MHC class II peptide binding prediction
 |  | AUC | PCC | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
allele | count | MRTA | Tepan | Pan1.0 | Pan2.0 | MKpan | MRTA | Tepan | Pan1.0 | Pan2.0 | MKpan |
DRB1*01:01 | 5166 | 0.801 | 0.726 | 0.778 | 0.794 | 0.802 | 0.619 | 0.447 | 0.571 | 0.627 | 0.628 |
DRB1*03:01 | 1020 | 0.751 | 0.663 | 0.746 | 0.792 | 0.778 | 0.438 | 0.277 | 0.465 | 0.560 | 0.543 |
DRB1*04:01 | 1024 | 0.763 | 0.724 | 0.775 | 0.802 | 0.801 | 0.534 | 0.423 | 0.591 | 0.652 | 0.657 |
DRB1*04:04 | 663 | 0.835 | 0.783 | 0.852 | 0.869 | 0.862 | 0.623 | 0.504 | 0.693 | 0.731 | 0.714 |
DRB1*04:05 | 630 | 0.808 | 0.760 | 0.808 | 0.823 | 0.828 | 0.566 | 0.456 | 0.594 | 0.626 | 0.631 |
DRB1*07:01 | 853 | 0.817 | 0.759 | 0.825 | 0.886 | 0.889 | 0.620 | 0.499 | 0.655 | 0.753 | 0.761 |
DRB1*08:02 | 420 | 0.786 | 0.773 | 0.841 | 0.869 | 0.851 | 0.523 | 0.452 | 0.637 | 0.70 | 0.679 |
DRB1*09:01 | 530 | 0.674 | 0.615 | 0.653 | 0.684 | 0.674 | 0.380 | 0.259 | 0.406 | 0.474 | 0.471 |
DRB1*11:01 | 950 | 0.819 | 0.726 | 0.799 | 0.875 | 0.894 | 0.603 | 0.450 | 0.580 | 0.721 | 0.761 |
DRB1*13:02 | 498 | 0.698 | 0.661 | 0.658 | 0.648 | 0.639 | 0.365 | 0.326 | 0.323 | 0.337 | 0.341 |
DRB1*15:01 | 934 | 0.729 | 0.694 | 0.738 | 0.769 | 0.763 | 0.513 | 0.437 | 0.533 | 0.598 | 0.597 |
DRB3*01:01 | 549 | 0.813 | 0.675 | 0.716 | 0.733 | 0.70 | 0.603 | 0.332 | 0.449 | 0.474 | 0.423 |
DRB4*01:01 | 446 | 0.746 | 0.694 | 0.724 | 0.762 | 0.764 | 0.508 | 0.370 | 0.448 | 0.515 | 0.529 |
DRB5*01:01 | 924 | 0.788 | 0.680 | 0.831 | 0.879 | 0.883 | 0.543 | 0.421 | 0.627 | 0.722 | 0.737 |
average | 14607 | 0.773 | 0.710 | 0.767 | 0.799 | 0.795 | 0.531 | 0.404 | 0.541 | 0.606 | 0.605 |