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Table 1 Mapping results of RNA-Seq reads of HHZ, P28 and H471 under 1d and 3d drought stress and control conditions

From: Comparative transcriptome sequencing of tolerant rice introgression line and its parents in response to drought stress

Samples Total filtered pair-end reads Total mapped reads (%) Unique mapped reads (%) Total mapped genes
HHZ-ck 1 2 × 8,894,670 14,403,823 (81.4) 13,766,465 (77.8) 23129
HHZ-ck 2 2 × 9,326,860 15,241,546 (81.8) 14,547,450 (78.0)
P28-ck 1 2 × 10,384,097 16,978,445 (81.9) 16,233,203 (78.3) 23693
P28-ck 2 2 × 10,326,754 16,811,305 (81.4) 16,047,198 (77.7)
H471-ck 1 2 × 10,068,639 16,551,528 (82.2) 15,823,734 (78.6) 23625
H471-ck 2 2 × 10,083,264 16,585,631 (82.3) 15,852,617 (78.6)
HHZ-1d 1 2 × 11,727,199 19,581,596 (83.5) 18,660,210 (79.6) 23078
HHZ-1d 2 2 × 9,958,934 16,628,254 (83.5) 15,864,006 (79.7)
P28-1d 1 2 × 11,594,160 19,305,500 (83.3) 18,463,197 (79.7) 22774
P28-1d 2 2 × 10,484,144 17,435,333 (83.2) 16,669,090 (79.6)
H471-1d 1 2 × 9,853,652 16,126,140 (81.9) 15,390,608 (78.1) 23320
H471-1d 2 2 × 10,868,092 17,847,671 (82.2) 17,055,619 (78.5)
HHZ-3d 1 2 × 10,071,423 16,584,356 (82.4) 15,857,639 (78.8) 22976
HHZ-3d 2 2 × 10,042,756 16,586,139 (82.6) 15,844,907 (78.9)
P28-3d 1 2 × 10,271,850 16,943,591 (82.5) 16,175,470 (78.8) 23017
P28-3d 2 2 × 10,093,202 16,568,958 (82.1) 15,817,307 (78.4)
H471-3d 1 2 × 10,087,890 16,669,962 (82.7) 15,912,430 (78.9) 22974
H471-3d 2 2 × 9,948,863 16,440,601 (82.7) 15,735,994 (79.1)
  1. Note: ck indicates well watered control; 1d and 3d indicate the drought treatment time; 1 and 2 in the first row indicate two replicates of each sample.