Skip to main content

Table 1 The rDNA repeat in 17 anophelines

From: Non-coding RNA gene families in the genomes of anopheline mosquitoes

Species

ETS “L”

ETS “S”

18S “L”

18S “S”

18S “C”

ITS1 “L”

ITS1 “S”

ITS1 “C”

5.8S

5.8S “S”

5.8S “C”

Albimanus

1538

L78065

1977

t.s.

Full

242

L78065

Full

160

t.s.

Full

Arabiensis

0

 

1981

t.s.

Full

346

DQ287772

Full

160

t.s.

Full

Atroparvus

0

 

1965

AM072973 [42]

Full

0

  

144

t.s.

part

Christyi

0

 

583

t.s.

Part

0

  

155

t.s.

Part

Culicifacies

0

 

0

  

345

EU244872

Full

160

t.s.

Full

Dirus

0

 

823

AF417779 [43]

Part

0

  

160

t.s.

Full

Epiroticus

0

 

1786

t.s.

Full (?)

0

  

160

t.s.

Full

Farauti

0

 

2046

AF121054 [44]

Full

1194

EF042721 [15]

Full

160

t.s.

Full

Funestus

0

 

1818

t.s.

Full

0

  

160

t.s.

Full

Gambiae

0

 

2015

AM157179 [2]

Full

344

AAAB01006374 [5]

Full

160

t.s.

Full

Maculatus

0

 

1950

AF440198

Full

0

  

160

t.s.

Full

Melas

0

 

0

  

0

  

160

t.s.

Full

Merus

0

 

1518

t.s.

Part

0

  

160

t.s.

Full

Minimus

0

 

1059

t.s.

Part

0

  

160

t.s.

Full

Quadriannulatus

0

 

1045

t.s.

Part

0

  

160

t.s.

Full

Sinensis

0

 

1795

t.s.

Full (?)

0

  

143

t.s.

Part

Stephensi

0

 

1903

t.s.

Full (?)

345

EU244871

Full

160

t.s.

Full

Species

ITS2 “L”

ITS2 “S”

ITS2 “C”

28S “L”

28S “S”

28S “C”

NTS “L”

    

Albimanus

244

L78065

Full

4022

t.s.

Full

0

    

Arabiensis

434

DQ287772

Full

1550

t.s., U10138, [45]

Part

1398

    

Atroparvus

308

AY050640

Full

0

  

0

    

Christyi

419

GQ870324

Full

0

  

0

    

Culicifacies

368

AY427754

Full

553

t.s.

Part

0

    

Dirus

506

DQ629915

Full

537

AF41781 [43]

Part

0

    

Epiroticus

572

AF469855

Full

0

  

0

    

Farauti

564

EF042721 [46]

Full

546

AF417815 [43]

Part

0

    

Funestus

724

JN994135

Full

3445

t.s.

Part

0

    

Gambiae

434

X67157

Full

4021

t.s.

Full

1733

    

Maculatus

363

AY803346

Full

391

AY120851

Part

0

    

Melas

437

GQ870314

Full

440

AF087512 [47]

Part

1118

    

Merus

437

GQ870313

Full

440

AF087514 [47]

Part

862

    

minimus

381

JN975457

Full

811

t.s.

Part

0

    

Quadriannulatus

465

JN994146

Full

440

AQU10137 [47]

Part

1540

    

Sinensis

469

GU384695 [46]

Full

4166

t.s.

Full

2896

    

Stephensi

466

AY157316

Full

4096

t.s.

Full

0

    
  1. The Table summarizes the data for the rDNA segments ETS, 18S, ITS1, 5.8S, ITS2, 28S and NTS. “L” includes the length of the sequence assembled for the corresponding DNA segment in base pairs, “S” the source of the sequence and “C” its completeness.
  2. Full: full length of genomic segment available; part.: only partial sequence of the genomic segment available; t.s.: this study; number in square brackets: published reference; alphanumeric number: Genbank/EMBL accession number. Accession numbers in italics refer to sequences obtained from public databases (Genbank/EMBL) for which no published reference is indicated. The question marks refer to the uncertainty as to the completeness of the sequence (see Results).