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Table 2 snoRNA genes in 19 anopheline taxa

From: Non-coding RNA gene families in the genomes of anopheline mosquitoes

Species

18S target from:

Length of 18S target

No stem

Possible stem

Terminal stem

Strong stem

Total

Genes/kb

Albimanus

 

1977

30

17

62

19

128

6.5

Arabiensis

 

1981

20

10

51

21

102

5.1

Atroparvus

 

1965

15

8

40

7

70

3.6

Christyi

 

583

3

1

5

1

10

1.7

Coluzzii

Gambiae

2015

20

11

38

25

94

4.7

Culicifacies

Funestus

1817

14

4

19

10

47

2.6

Dirus

 

594

8

2

11

2

23

3.9

Epiroticus

 

1786

12

12

19

12

55

3.1

Farauti

 

2046

26

19

46

11

102

5

Funestus

 

1817

14

9

23

8

54

3

Gambiae PEST

 

2015

31

13

94

22

160

7.9

Gambiae S

 

2015

24

13

43

22

102

5.1

Maculatus

 

1950

9

5

29

9

52

2.7

Melas

Gambiae

2015

13

11

41

23

88

4.4

Merus

 

1518

19

11

43

17

90

5.9

Minimus

 

1059

7

6

13

4

30

2.8

Quadrianulatus

 

1045

10

7

20

12

49

4.7

Sinensis

 

1795

14

5

29

6

54

3

Stephensi

 

1903

30

13

46

10

99

5.2

Species

28S target from:

Length of 28S target

No stem

Possible stem

Terminal stem

Strong stem

Total

Genes/kb

Albimanus

 

4022

80

43

158

32

320

8

Arabiensis

 

1110

17

8

21

8

55

5

Atroparvus

Sinensis

4069

40

35

76

22

174

4.3

Christyi

 

524

4

3

9

3

19

3.6

Coluzzii

Gambiae

3440

63

30

82

36

220

6.4

Culicifacies

 

560

7

6

6

1

20

3.6

Dirus

Farauti

546

8

6

25

12

53

9.7

Epiroticus

Christyi

524

4

4

12

8

28

5.3

Farauti

 

546

9

3

12

5

29

5.3

Funestus

 

3445

43

21

53

16

134

3.9

Gambiae PEST

 

3440

75

39

126

52

300

8.7

Gambiae S

 

3440

66

35

98

29

236

6.9

Maculatus

 

351

2

2

7

0

11

3.1

Melas

 

440

4

1

6

1

12

2.7

Merus

 

440

5

2

10

2

19

4.3

Minimus

 

811

7

5

15

2

31

3.8

Quadrianulatus

 

440

3

2

8

1

14

3.2

Sinensis

 

4096

42

15

61

12

129

3.1

Stephensi

 

3801

56

21

91

21

189

5

Sinensis

Sinensis

4096

42

15

61

12

129

3.1

Stephensi SDA

Stephensi

3801

54

20

92

21

189

5.0

  1. The table lists both the taxa examined and those whose sequences were used as targets if different (see Results). The numbers refer to the individual candidate genes containing the different snoRNA structures as well as their total and the number of putative genes per 100 bp of target sequence used. The length of the target sequences is also indicated.