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Table 4 Differentially expressed WRKY , MYB, AP2/ERF , GRAS and HSF genes responding to aphid herbivory in the comparison between CK and Y (CK-VS-Y)

From: Gene expression profiles responses to aphid feeding in chrysanthemum (Chrysanthemum morifolium)

GeneID CK-RPKM Y-RPKM log2Ratio(Y/CK) Up-Down-Regulation(Y/CK) P-value FDR Gene description
Unigene12209_All 20.74 92.22 2.15 up 3.73E-45 7.69E-43 WRKY transcription factor
Unigene41938_All 43.08 183.74 2.09 up 9.59E-37 1.56E-34 WRKY transcription factor
Unigene32329_All 10.38 43.97 2.08 up 2.25E-08 8.60E-07 WRKY transcription factor
Unigene10297_All 85.74 348.25 2.02 up 3.24E-56 8.40E-54 WRKY transcription factor
Unigene37863_All 85.47 340.39 1.99 up 7.04E-94 3.33E-91 WRKY transcription factor
Unigene20571_All 20.38 73.31 1.85 up 2.52E-19 2.19E-17 WRKY transcription factor
Unigene37259_All 17.93 64.06 1.84 up 9.77E-11 4.64E-09 WRKY transcription factor
Unigene37869_All 268.18 945.12 1.82 up 1.82E-155 2.00E-152 WRKY transcription factor
Unigene7360_All 74.03 251.85 1.77 up 6.60E-41 1.20E-38 WRKY transcription factor
Unigene37669_All 337.88 1022.27 1.60 up 9.04E-90 4.01E-87 WRKY transcription factor
Unigene1677_All 38.23 115.12 1.59 up 3.73E-18 2.99E-16 WRKY transcription factor
Unigene17473_All 33.01 69.77 1.08 up 1.31E-07 4.55E-06 WRKY transcription factor
Unigene6575_All 23.05 118.37 2.36 up 3.80E-48 8.14E-46 MYB transcription factor
Unigene27371_All 35.74 136.17 1.93 up 5.40E-40 9.55E-38 MYB transcription factor
Unigene29130_All 35.63 95.08 1.42 up 1.66E-37 2.74E-35 MYB transcription factor
Unigene5110_All 46.71 113.33 1.28 up 7.40E-29 9.65E-27 MYB transcription factor
Unigene20732_All 27.31 61.70 1.18 up 2.12E-12 1.18E-10 MYB transcription factor
Unigene1509_All 21.86 48.30 1.14 up 2.69E-07 9.03E-06 MYB transcription factor
Unigene10992_All 29.16 8.50 −1.78 down 2.82E-16 2.01E-14 MYB transcription factor
Unigene33772_All 33.67 115.91 1.78 up 1.32E-15 9.07E-14 AP2/ERF transcription factor
Unigene29332_All 26.35 85.91 1.71 up 2.06E-18 1.68E-16 AP2/ERF transcription factor
Unigene37496_All 281.36 569.19 1.02 up 3.06E-30 4.18E-28 AP2/ERF transcription factor
Unigene20692_All 107.36 250.56 1.22 up 6.69E-43 1.30E-40 AP2/ERF transcription factor
Unigene28929_All 196.76 405.51 1.04 up 1.12E-67 3.67E-65 AP2/ERF transcription factor
Unigene20430_All 11.14 71.20 2.68 up 4.27E-43 8.31E-41 AP2/ERF transcription factor
Unigene21602_All 24.78 54.70 1.14 up 1.41E-28 1.81E-26 GRAS transcription factor
Unigene23619_All 12.85 57.10 2.15 up 2.21E-26 2.59E-24 GRAS transcription factor
Unigene11471_All 9.76 31.50 1.69 up 5.41E-07 1.74E-05 GRAS transcription factor
Unigene41060_All 39.09 111.00 1.50 up 6.35E-12 3.35E-10 GRAS transcription factor
Unigene24298_All 32.99 76.36 1.21 up 6.17E-23 6.34E-21 Heat shock factor
Unigene3496_All 27.02 104.20 1.95 up 2.08E-49 4.55E-47 Heat shock factor
Unigene24225_All 14.71 5.05 −1.54 down 1.58E-07 5.46E-06 Heat shock factor
  1. The criteria used for assigning significance were: P-value < 0.05, FDR ≤ 0.001, and absolute |log2Ratio(Y/CK)| ≥ 1. CK: control; Y: aphid infestation treatment.