Ratio of gene expression O2/N2 as determined by: | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Locus tag | Gene | Gene product | Primer sequences | Transcriptome analysis | RT-qPCR | |||||
Forward | Reverse | 1 h | 5 h | 8 h | 1 h | 5 h | 8 h | |||
llmg_0408 | noxE | NADH oxidase | TTATGCCAAAGCAGAgGATTTT | GGAATAATTGGACGTGAACCTG | 22.9 | −3.2 | 26.7 | 2.0 | ||
llmg_0074 | pdhA | pyruvate dehydrogenase E1 component alpha subunit | AGGACGTATGGGATTCTTTGG | TTACCAAGTTGATGTCCACGAG | 6.0 | −2.3 | 7.7 | 2.8 | 4.1 | |
llmg_1541 | nrdH | Glutaredoxin-like protein nrdH. | AATTGTATGCAATGCAAAATGG | ATTACAGGAGCAGCTCGAAAAC | 10.3 | 2.8 | 28.3 | 4.7 | 6.9 | |
llmg_0776 | trxB2 | thioredoxin reductase | TGGTCTtTATGCGGCTTTTTAt | GGTAAAGATTTTGtGGcTGACC | 4.3 | 13.3 | 2.4 | |||
llmg_2432 | adhE | alcohol-acetaldehyde dehydrogenase | GGTTCTGAAGTGACTCCATTTG | TCATAACAAACTCAGGGTCAACA | −7.5 | −8.55 | ||||
llmg_1464 | adlC | alpha-acetolactate decarboxylase | GGCTGACCAACCTTATTTTACA | TTCaGTgATGAAATTTTGGACA | 4.6 | 3.7 | 11.8 | 2.3 | 4.8 | |
llmg_1699 | choS | choline ABC transporter permease | TTTTGCAAGTCACaGGAATTTTT | GGaAAAATCGCATAAACAACAAG | 3.6 | 10.0 | 4.1 | 3.1 | ||
lmg2144 | lmg2144 | conserved hypothetical protein | TtGGcGGAATaaTAGGctgt | cGTgCgtTgaAgAtAgAGACC | 5.3 | −4.3 | 9.0 | 2.7 | ||
lmg0274 | lmg0274 | conserved hypothetical protein | CTCggTCATcGGAAAAGAAG | TTtGTaGCTTgcTGCCAGAG | 4.7 | 2.3 | 2.4 | 5.3 | ||
llmg_0100 | cadA | cation-transporting ATPase | TTTGGCTTTAATCAGCCTTTTT | CCACCAGTAAAGTCGCAATAAT | −4.1 | 2.1 | 3.5 | |||
llmg_0349 | fhuD | ferrichrome ABC transporter substrate binding protei | CATTAGGTGCAAATGTTGTTGG | TCAGGATTTTGAGCAATCAATTT | 5.7 | 14.8 | 2.8 | 2.5 | ||
llmg_2050 | tuf* | translation elongation factor EF-Tu | CACTCCATTCTTCGACAACTACC | AGGCATTACCATTTCAGTTCCTT | ||||||
llmg_0102 | parA* | chromosome partitioning protein parA. | TTcTACAgCCgATtATtGTTCGT | TGGgATtGTTTCTAAtCCAGCTA | ||||||
llmg_0496 | hllA* | HU-like DNA-binding protein | TTCAATTGATCGGTTTTGGTACT | TCAATGCTTTACCAGCTTTGAAT |