Skip to main content

Table 3 Boiga irregularis LC/MS E protein identifications

From: RNA-seq and high-definition mass spectrometry reveal the complex and divergent venoms of two rear-fanged colubrid snakes

Transcript

PLGS score

Peptide

% Seq.

 

name

score

matches

coverage

Group

SVMPIII-1

896.04

29

57.84

1

SVMPIII-2b

2,805.59

26

62.77

2

SVMPIII-2a

2,694.91

29

66.50

3

SVMPIII-4a

900.64

29

64.92

3

SVMPIII-4b

890.08

30

64.92

3

CRISP-1b

6,457.39

23

93.67

4

CRISP-1d

6,198.10

21

85.52

4

CRISP-1a

6,248.59

21

87.33

5

CRISP-1c

6,507.89

23

95.48

5

NatA-10

327.40

5

7.92

6

3FTx-1a

4,423.76

10

78.89

7

3FTx-1b

6,549.43

10

78.89

7

3FTx-1c

4,423.76

10

78.89

7

3FTx-1d

6,549.43

10

78.89

7

3FTx-1e

6,549.43

10

78.89

7

3FTx-1f

4,423.76

8

74.44

7

3FTx-3a

8,140.22

6

40.22

8

3FTx-3b

8,140.22

6

40.22

8

3FTx-3c

8,140.22

6

40.22

8

3FTx-3d

2,067.74

4

20.65

8

3FTx-3e

8,140.22

6

40.22

8

3FTx-3f

8,140.22

6

40.22

8

3FTx-3g

8,140.22

6

40.22

8

3FTx-3h

8,140.22

6

40.22

8

3FTx-3i

8,140.22

6

40.22

8

3FTx-3j

6,072.48

2

19.78

8

3FTx-3k

2,067.74

4

20.65

8

3FTx-4a

7,234.41

15

100.00

9

3FTx-4b

6,945.58

13

87.21

9

3FTx-4c

5,137.73

14

94.19

9

3FTx-4d

7,234.41

14

92.94

9

3FTx-5

480.09

2

53.97

10

3FTx-6b

480.09

2

53.97

10

3FTx-6a

1,252.34

3

53.97

11

3FTx-6c

1,252.34

3

54.84

11

3FTx-7a

6,785.76

11

66.67

12

3FTx-7b

6,815.80

12

78.89

12

3FTx-7c

6,785.76

11

66.67

12

3FTx-7d

2,506.53

8

62.22

12

3FTx-8a

3,911.73

9

51.11

13

3FTx-8b

3,911.73

9

51.11

13

3FTx-8c

3,911.73

9

51.11

13

3FTx-8d

3,911.73

9

51.11

13

3FTx-8e

3,911.73

9

51.11

13

3FTx-8f

3,911.73

8

39.33

13

3FTx-9a

9,625.12

14

81.40

14

3FTx-9b

9,625.12

14

81.40

14

3FTx-9c

9,625.12

14

81.40

14

3FTx-9d

9,625.12

14

81.40

14

3FTx-9e

9,625.12

13

69.41

14

3FTx-9f

9,625.12

13

69.41

14

3FTx-9g

9,625.12

14

81.40

14

3FTx-10a

3,753.53

10

75.58

15

3FTx-10b

4,914.06

13

91.86

15

3FTx-10c

3,753.53

10

79.27

15

3FTx-10d

4,914.06

12

84.71

15

3FTx-10e

4,914.06

12

84.71

15

3FTx-10f

3,530.34

10

69.77

15

3FTx-10g

4,914.06

13

91.86

15

3FTx-10h

4,914.06

13

91.86

15

3FTx-10i

4,914.06

13

76.85

15

3FTx-2a

6,549.43

9

55.56

–

3FTx-2b

6,549.43

9

55.56

–

3FTx-2c

6,549.43

9

55.56

–

3FTx-2d

4,423.76

9

55.56

–

3FTx-2e

6,549.43

9

55.56

–

3FTx-2f

5,175.20

6

34.44

–

3FTx-2g

3,049.53

6

34.44

–

  1. Transcripts were grouped on the basis of shared, unique peptides. Identifications without a group designation lacked unique identifying peptides but still had peptide matches. Abbreviations: 3FTx–three-finger toxin, CRISP–cysteine-rich secretory protein, SVMPIII–snake venom metalloproteinase (P-III).
Back to article page

BMC Genomics

ISSN: 1471-2164

Contact us