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Table 1 Assembly characteristics

From: Transcriptomic analysis of the lesser spotted catshark (Scyliorhinus canicula) pancreas, liver and brain reveals molecular level conservation of vertebrate pancreas function

Tissue(s) Number of contigs >300 bp Contig N50 (bp) Longest contig (bp) Mean ORF length (bp) Max ORF length (bp) Number ORFs with signal peptide
Pancreas only 6551 429 5386 177 3005 257 (3.92%)
Brain only 21241 798 16085 338 13751 1029 (4.84%)
Liver only 3423 676 13906 271 13532 220 (6.43%)
Pancreas, brain 3847 1479 10710 482 10394 210 (5.46%)
Pancreas, liver 924 1039 5907 329 4505 62 (6.71%)
Brain, liver 2482 1329 12080 481 10403 149 (6.00%)
Pancreas, liver, brain 6326 2257 11135 705 9329 356 (5.63%)
  1. Tissue distribution of transcripts was assigned by read mapping, taking a value of ≥1 fragments per kilobase per million mapped reads (FPKM) as evidence of expression.