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Figure 5 | BMC Genomics

Figure 5

From: The grapevine gene nomenclature system

Figure 5

Molecular phylogenetic analysis of Vitis vinifera and Arabidopsis thaliana sugar transporter gene models by the Maximum Likelihood method. The trees are adapted from [3] and produced using MUSCLE [36] and PhyML with the JTT amino acid substitution model. Bootstrapping was performed with 100 replicates. In addition to the original picture, branches corresponding to partitions reproduced in less than 70% of bootstrap replicates were collapsed. The percentage of replicate trees in which the associated taxa clustered together in the bootstrap test (100 replicates) is shown next to the branches [38]. A) sucrose transporters B) hexose transporters C) ERD6-like proteins. Arrows point toward recommended Vitis symbols, the green symbols are the putative symbols that would be used had not the Vitis gene been previously annotated in the literature. Recommended synonyms are in brackets.

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