Table 6 Taxonomic identity of 16S OTUs supported by rRNAs assembled from metatranscriptome data for intact midgut and midgut contents
Classification to lowest possible taxonomic rank | Percent nucleotide identity | Number of assembled rRNAs | Persistant? |
|---|---|---|---|
Acinetobacter | 97 | 1 | No |
Actinomyces | 100 | 1 | No |
Actinomycetales | 95 | 2 | No |
Actinomycetales | 96 | 2 | Yes |
Actinomycetales | 96 | 1 | No |
Bacteria | 96 | 1 | No |
Burkholderiaceae | 97 | 1 | Yes |
Caryophanon | 100 | 1 | No |
Cellovibrio | 98 | 2 | No |
Curtobacterium | 97 | 1 | No |
Enterobacteriaceae | 99 | 2 | No |
Enterobacteriaceae | 97 | 3 | No |
Enterobacteriaceae | 96 | 4 | No |
Enterobacteriaceae | 98 | 1 | Yes |
Enterobacteriaceae | 95 | 1 | Yes |
Novosphingobium | 96 | 1 | Yes |
Pasteurellaceae | 95 | 1 | No |
Pediococcus | 95 | 1 | Yes |
Propionibacterium | 99 | 1 | Yes |
Pseudomonadaceae | 100 | 1 | No |
Pseudomonadaceae | 97 | 1 | No |
Pseudomonas | 97 | 1 | Yes |
Sphingobacterium | 98 | 1 | No |
Staphylococcus | 99 | 1 | Yes |
Streptococcus | 98 | 1 | No |