Table 2 Alignment statistics for zebra finch and amakihi against amakihi genome
From: Genomic resources for the endangered Hawaiian honeycreepers
Chrom. | % of zebra finch sites aligned (non-N) | % of amakihi sites aligned (non-N) | Uncorrected p-distance | Kimura two parameter model distance |
|---|---|---|---|---|
chr1 | 87.54 | 90.67 | 0.09 | 0.09 |
chr10 | 87.66 | 91.68 | 0.08 | 0.08 |
chr11 | 87.65 | 89.89 | 0.08 | 0.08 |
chr12 | 85.83 | 90.77 | 0.08 | 0.08 |
chr13 | 84.46 | 89.64 | 0.08 | 0.09 |
chr14 | 88.44 | 89.85 | 0.08 | 0.08 |
chr15 | 83.49 | 87.47 | 0.08 | 0.08 |
chr17 | 83.60 | 87.63 | 0.08 | 0.08 |
chr18 | 81.18 | 79.45 | 0.08 | 0.09 |
chr19 | 81.35 | 86.12 | 0.08 | 0.08 |
chr2 | 87.90 | 90.72 | 0.09 | 0.09 |
chr20 | 81.75 | 87.00 | 0.08 | 0.08 |
chr21 | 77.05 | 81.73 | 0.08 | 0.09 |
chr22 | 63.61 | 70.26 | 0.10 | 0.11 |
chr23 | 71.64 | 78.85 | 0.09 | 0.09 |
chr24 | 72.44 | 78.98 | 0.09 | 0.10 |
chr25 | 72.01 | 75.09 | 0.10 | 0.11 |
chr26 | 77.91 | 79.94 | 0.09 | 0.09 |
chr27 | 65.53 | 73.24 | 0.09 | 0.10 |
chr28 | 75.92 | 72.64 | 0.09 | 0.09 |
chr3 | 91.56 | 92.23 | 0.08 | 0.09 |
chr4 | 87.78 | 91.91 | 0.09 | 0.09 |
chr5 | 87.80 | 91.76 | 0.08 | 0.09 |
chr6 | 85.38 | 91.11 | 0.08 | 0.09 |
chr7 | 83.72 | 91.19 | 0.08 | 0.09 |
chr8 | 87.09 | 92.25 | 0.08 | 0.08 |
chr9 | 83.21 | 90.02 | 0.08 | 0.09 |
chr1A | 88.13 | 90.70 | 0.09 | 0.09 |
chr1B | 68.96 | 78.58 | 0.10 | 0.11 |
chr4A | 84.31 | 90.13 | 0.08 | 0.09 |
chrLG2 | 19.65 | 64.27 | 0.15 | 0.17 |
chrLG5 | 5.49 | 62.13 | 0.15 | 0.17 |
chrLGE22 | 73.78 | 79.21 | 0.09 | 0.10 |
chrZ | 82.55 | 84.25 | 0.10 | 0.11 |