Figure 3

Mapping of the good quality reads from the metagenomic sequencing of DNA from the surfaces of three cheeses. The good quality reads coming from 3 samples of cheese surface were aligned to 5873 genomes coming from NCBI and 117 genomes coming from our project. The repartition of the good quality reads that map only on the NCBI genomes (blue), on the genome sequenced in our project (green), on both NCBI and our genome (light green) and on Bos taurus genome (orange) is presented in pie charts. The unmapped good reads are presented in dark and light grey, respectively those lacking a reference and those potentially unmappable for technical reason.