Table 5 Summary of QTL for root total pigment estimate (RTPE) and anthocyanin pigments (Cy3XG, Cy3XGG, Cy3XSGG and Cy3XFGG) in the 70349Â F 2 population
Trait | QTL ID | Chromosome | Position (cM) | LOD value | 1.5 LOD support interval | Nearest marker | % variation explained |
|---|---|---|---|---|---|---|---|
RTPE | Q1 | 3 | 49.1 | 26.7 | 48.1-49.5 | K2287 | 50.5 |
| Â | Q2 | 1 | 63.0 | 3.7 | 53.0-81.0 | K1664 | 4.9 |
Cy3XG | Q1 | 3 | 50.7 | 14.8 | 47.9-55.1 | GSSR-017 | 26.4 |
Q2 | 8 | 56.1 | 7.2 | 47.1-64.1 | K0973 | 11.3 | |
Q3 | 2 | 68.5 | 6.2 | 67.8-69.3 | K2669 | 9.6 | |
Q4 | 6 | 0 | 3.6 | 0-7.0 | K1768 | 5.3 | |
Cy3XGG | Q1 | 3 | 27.1 | 104.7 | 27.0-27.7 | Raa1/K0149 | 73.3 |
Q2 | 3 | 50.1 | 84.2 | 49.5-50.4 | K0627 | 36.6 | |
Q3 | 1 | 74.0 | 71.4 | 73.0-75.0 | K1964 | 23.4 | |
Cy3XSGG | Q1 | 3 | 44.1 | 41.6 | 43.1-46.1 | P3 | 51.7 |
Q2 | 3 | 25.9 | 17.5 | 24.1-27.7 | K1323 | 13.9 | |
Q3 | 6 | 49.0 | 8.4 | 30.1-41.5 | K2617 | 5.7 | |
Cy3XFGG | Q1 | 3 | 44.1 | 66.8 | 43.1-45.0 | P3 | 59.2 |
Q2 | 3 | 27.1 | 38.3 | 25.1-27.7 | K0149 | 18.9 | |
| Â | Q3 | 4 | 19.1 | 13.9 | 17.1-21.1 | K3591 | 4.4 |