Table 3 Pairwise parameters for candidate alkane hydroxylases in two conserved pfam domains, p450 and Pry_redox_3
From: Alkane hydroxylase genes in psychrophile genomes and the potential for cold active catalysis
pfam domain | Protein region | Protein parameter | Total number of comparisons1 | Cases where psychrophile was higher |
|---|---|---|---|---|
p450 | Whole | Isoelectric point | 9 | 0 |
p450 | Whole | Asparagine | 9 | 8 |
p450 | Whole | Arginine | 9 | 0 |
p450 | Whole | Threonine | 9 | 8 |
p450 | Whole | Valine | 9 | 9 |
p450 | Coil | Isoleucine | 9 | 8 |
p450 | Coil | Aspargine | 9 | 9 |
p450 | Coil | Valine | 9 | 9 |
p450 | β-sheet | Flexibility | 9 | 8 |
p450 | β-sheet | Isoelectric point | 9 | 8 |
p450 | β-sheet | Alanine | 9 | 8 |
p450 | β-sheet | Glycine | 9 | 9 |
p450 | β-sheet | Isoleucine | 9 | 1 |
p450 | β-sheet | Proline | 9 | 9 |
p450 | α-helix | Flexibility | 9 | 8 |
p450 | α-helix | Aspartic acid | 9 | 9 |
p450 | α-helix | Isoleucine | 9 | 0 |
p450 | α-helix | Arginine | 9 | 0 |
Pyr_redox_3 | Whole | Cysteine | 11 | 10 |
Pyr_redox_3 | Whole | Glutamic acid | 11 | 0 |
Pyr_redox_3 | Whole | Valine | 11 | 10 |
Pyr_redox_3 | Coil | Aspartic acid | 11 | 10 |
Pyr_redox_3 | Coil | Glycine | 11 | 1 |
Pyr_redox_3 | β-sheet | GRAVY | 11 | 10 |
Pyr_redox_3 | β-sheet | Cysteine | 11 | 11 |
Pyr_redox_3 | α-helix | Alanine | 11 | 10 |
Pyr_redox_3 | α-helix | Glutamic acid | 11 | 0 |
Pyr_redox_3 | α-helix | Asparagine | 11 | 1 |