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Table 1 Raw and clean read statistics of small RNAs isolated from Malus hupehensis leaves

From: Genome-wide identification of vegetative phase transition-associated microRNAs and target predictions using degradome sequencing in Malus hupehensis

 

A

J

Count

%

 

Count

total_reads

16316909

 

total_reads

16316909

high_quality

16262057

100%

high_quality

16262057

3′adapter_null

7741

0.05%

3′adapter_null

7741

insert_null

2554

0.02%

insert_null

2554

5′adapter_contaminants

25157

0.15%

5′adapter_contaminants

25157

smaller_than_18nt

5041

0.03%

smaller_than_18nt

5041

polyA

988

0.01%

polyA

988

clean_reads

16220576

99.74%

clean_reads

16220576