Class | Repeat class (# families) | Repeat type | Total length (bp)* | Percent of repetitive content | Percent of genome |
---|---|---|---|---|---|
Class I | LTR Retrotransposon (21) | Ty1-Copia | 1,039,062 | 15.7 | 2.6 |
 |  | Ty3-Gypsy | 1,803,457 | 27.2 | 4.5 |
 |  | Unclassified | 766,193 | 11.5 | 1.9 |
Subtotal | Â | Â | 3,608,712 | 54.4 | 9.1 |
 | Non LTR Retrotransposon (4) | Tad1-like | 697,083 | 10.5 | 1.8 |
 |  | Unclassified | 371,533 | 5.6 | 0.9 |
Subtotal | Â | Â | 1,068,616 | 16.1 | 2.7 |
Class II | DNA Transposon (15) | CACTA En/Spm | 78,909 | 1.2 | 0.2 |
 |  | hAT | 70,346 | 1.1 | 0.2 |
 |  | Tc1-Mariner | 58,977 | 0.9 | 0.1 |
 |  | Tc5/Pogo | 44,941 | 0.7 | 0.1 |
 |  | Unclassified | 228,727 | 3.4 | 0.6 |
 | MITEs (13) |  | 98,726 | 1.5 | 0.2 |
 | Helitron (3) |  | 390,961 | 5.9 | 1.0 |
Subtotal | Â | Â | 971,587 | 14.6 | 2.4 |
Unclassified | Unclassified (37) | Unclassified | 986,081 | 14.9 | 2.5 |
Total | Â | Â | 6,634,996 | Â | 16.7 |