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Table 3 Randomness of repetitive sequence distribution along each Mycosphaerella graminicola chromosome using a non-parametric runs test

From: The landscape of transposable elements in the finished genome of the fungal wheat pathogen Mycosphaerella graminicola

  Chromosome
Statistic 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21
n 122 78 70 58 58 54 54 49 43 34 33 30 24 16 13 13 12 12 11 10 9
n1 35 26 23 17 24 22 18 18 17 12 10 13 9 6 6 5 4 4 6 6 4
n0 87 52 47 41 34 32 36 31 26 22 23 17 15 10 7 8 8 8 5 4 5
Runs 55 36 31 21 29 22 19 15 19 11 13 13 7 10 7 6 5 7 5 4 6
P value       2.7 e-2   1.9 e-6   1.3 e-4        1.5 e-2 1.5 e-2 2.7 e-2   
  1. Each chromosome was divided into non-overlapping 50-kb bins. Repetitive content in each bin was compared to the chromosomal average repetitive content and each bin was scored either 1 (bin repetitive content greater than chromosomal average) or 0 (bin repetitive content lower than chromosomal average). Each consecutive occurence of 0 s and 1 s was calculated as a run. n, the total number of observations; n1, count of occurrences of ones; n0, count of occurrences of zeros; Runs, number of consecutive occurrences or runs of ones and zeros. P < 0.0.