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Figure 3 | BMC Genomics

Figure 3

From: Investigation of protein secretion and secretion stress in Ashbya gossypii

Figure 3

Overall variations in the A. gossypii transcriptome after addition of DTT. The data refers to the outcome of the LIMMA analysis for differentially expressed genes within 30 min, 1 h and 4 h of exposure to DTT, when compared to the time immediately before DTT addition (fold change > 1.5 and p-value < 0.01). The Venn diagrams indicate the number of genes that had increased (A) or reduced (B) expression after 30 min, 1 h and 4 h of exposure to DTT. In table (C) the absolute number and relative percentage (between brackets) of genes transcriptionally up-regulated (↑), down-regluated (↓) and unchanged (=) by DTT after different exposure times are indicated. The Volcano plots (D) obtained from the LIMMA analysis show the overall significant fold changes in the A. gossypii gene expression profiles after 30 min, 1 h and 4 h of DTT addition. Negative fold changes represent genes with increased (↑) expression and positive fold changes genes with reduced (↓) expression after exposure to DTT.

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